RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SLC41A1Q8IVJ1 513 aa16.47■□□□□ 0.23
LINC01116-202ENST00000339037 TRIML1Q8N9V2 468 aa16.47■□□□□ 0.23
LINC01116-202ENST00000339037 ZCCHC14Q8WYQ9 949 aaKnown RBP16.47■□□□□ 0.23
LINC01116-202ENST00000339037 BHMTQ93088 406 aa16.47■□□□□ 0.23
LINC01116-202ENST00000339037 CACNA2D2Q9NY47 1150 aa16.47■□□□□ 0.23
LINC01116-202ENST00000339037 PCDHA5Q9Y5H7 936 aa16.47■□□□□ 0.23
LINC01116-202ENST00000339037 A0A1W2PQD8 194 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 H0Y626 953 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 PDXKO00764 312 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 IKBKBO14920 756 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 KLRC4O43908 158 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 TRIM16O95361 564 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 SYPP08247 313 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 SLFN14P0C7P3 912 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 RDXP35241 583 aaKnown RBP16.46■□□□□ 0.23
LINC01116-202ENST00000339037 INCA1Q0VD86 236 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 C10orf120Q5SQS8 335 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 CEP135Q66GS9 1140 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 KLHDC10Q6PID8 442 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 OR2I1PQ8NGU4 316 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 MRGPRX1Q96LB2 322 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 HNRNPABQ99729 332 aaKnown RBP16.46■□□□□ 0.23
LINC01116-202ENST00000339037 IMPG2Q9BZV3 1241 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 KCTD10Q9H3F6 313 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 NMUR1Q9HB89 426 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 PNPLA8Q9NP80 782 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.46■□□□□ 0.23
LINC01116-202ENST00000339037 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.46■□□□□ 0.23
LINC01116-202ENST00000339037 DNMT3LQ9UJW3 386 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 KLK13Q9UKR3 277 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 FRMD4BQ9Y2L6 1034 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 RAD54BQ9Y620 910 aa16.46■□□□□ 0.23
LINC01116-202ENST00000339037 FASNP49327 2511 aaKnown RBP16.46■□□□□ 0.22
LINC01116-202ENST00000339037 A0A1W2PQH9 124 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 SRRM3A6NNA2 597 aaPredicted RBP16.45■□□□□ 0.22
LINC01116-202ENST00000339037 HHLA1C9JL84 531 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 GFRA2O00451 464 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 MDM4O15151 490 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 NDUFS2O75306 463 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 HLA-DRAP01903 254 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 RARGP13631 454 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 PLA2G4AP47712 749 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 SYCP2LQ5T4T6 812 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 ATL3Q6DD88 541 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 KIAA1324Q6UXG2 1013 aaKnown RBP16.45■□□□□ 0.22
LINC01116-202ENST00000339037 Q6ZNB5 142 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 TADA2BQ86TJ2 420 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 RGL4Q8IZJ4 473 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 FOXJ1Q92949 421 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 CYFIP2Q96F07 1278 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 TWNKQ96RR1 684 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 NT5C1AQ9BXI3 368 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 SLC6A17Q9H1V8 727 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 FAM124BQ9H5Z6 455 aaPredicted RBP16.45■□□□□ 0.22
LINC01116-202ENST00000339037 SLC24A3Q9HC58 644 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 CD93Q9NPY3 652 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 PLK2Q9NYY3 685 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 SUSD2Q9UGT4 822 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 SERTAD1Q9UHV2 236 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 NAGPAQ9UK23 515 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 NUDT5Q9UKK9 219 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 RCOR1Q9UKL0 485 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 CFAP45Q9UL16 551 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 MSRB2Q9Y3D2 182 aa16.45■□□□□ 0.22
LINC01116-202ENST00000339037 PCDH15Q96QU1 1955 aa16.44■□□□□ 0.22
LINC01116-202ENST00000339037 ACTN4O43707 911 aaKnown RBP16.44■□□□□ 0.22
LINC01116-202ENST00000339037 CISD3P0C7P0 127 aa16.44■□□□□ 0.22
LINC01116-202ENST00000339037 STARD3Q14849 445 aa16.44■□□□□ 0.22
LINC01116-202ENST00000339037 PLEKHG6Q3KR16 790 aa16.44■□□□□ 0.22
LINC01116-202ENST00000339037 KMT5BQ4FZB7 885 aa16.44■□□□□ 0.22
LINC01116-202ENST00000339037 PTCD2Q8WV60 388 aaKnown RBP16.44■□□□□ 0.22
LINC01116-202ENST00000339037 PAGE5Q96GU1 130 aa16.44■□□□□ 0.22
LINC01116-202ENST00000339037 ZNF419Q96HQ0 510 aaPredicted RBP16.44■□□□□ 0.22
LINC01116-202ENST00000339037 CYP3A43Q9HB55 503 aa16.44■□□□□ 0.22
LINC01116-202ENST00000339037 DNAAF2Q9NVR5 837 aaKnown RBP16.44■□□□□ 0.22
LINC01116-202ENST00000339037 GTF3C3Q9Y5Q9 886 aa16.44■□□□□ 0.22
LINC01116-202ENST00000339037 WASH3PC4AMC7 463 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 STC2O76061 302 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 CD59P13987 128 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 GNSP15586 552 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 CD58P19256 250 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 VAMP7P51809 220 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 KIF11P52732 1056 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 FAM193AP78312 1265 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 SLC14A1Q13336 389 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 HNRNPDQ14103 355 aaKnown RBP16.43■□□□□ 0.22
LINC01116-202ENST00000339037 ZNF423Q2M1K9 1284 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 WDR45BQ5MNZ6 344 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 C1orf220Q5T0J3 134 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 CCDC186Q7Z3E2 898 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 CDK5RAP1Q96SZ6 601 aaKnown RBP16.43■□□□□ 0.22
LINC01116-202ENST00000339037 DNAI2Q9GZS0 605 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 NIF3L1Q9GZT8 377 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 CLIC5Q9NZA1 410 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 ZDHHC9Q9Y397 364 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 STON1Q9Y6Q2 735 aa16.43■□□□□ 0.22
LINC01116-202ENST00000339037 SMG1Q96Q15 3661 aaKnown RBP16.42■□□□□ 0.22
LINC01116-202ENST00000339037 CALUO43852 315 aaPredicted RBP16.42■□□□□ 0.22
LINC01116-202ENST00000339037 KIF20AO95235 890 aa16.42■□□□□ 0.22
LINC01116-202ENST00000339037 PENKP01210 267 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms