RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 DRG1Q9Y295 367 aaKnown RBP19.47■□□□□ 0.71
PSPC1-201ENST00000338910 C2orf71A6NGG8 1288 aa19.47■□□□□ 0.71
PSPC1-201ENST00000338910 TNPO2O14787 897 aaKnown RBP19.47■□□□□ 0.71
PSPC1-201ENST00000338910 CRABP2P29373 138 aa19.47■□□□□ 0.71
PSPC1-201ENST00000338910 RFC1P35251 1148 aaPredicted RBP19.47■□□□□ 0.71
PSPC1-201ENST00000338910 ETV4P43268 484 aa19.47■□□□□ 0.71
PSPC1-201ENST00000338910 HIF1AQ16665 826 aa19.47■□□□□ 0.71
PSPC1-201ENST00000338910 LIN52Q52LA3 116 aa19.47■□□□□ 0.71
PSPC1-201ENST00000338910 RFX8Q6ZV50 586 aa19.47■□□□□ 0.71
PSPC1-201ENST00000338910 TMEM176AQ96HP8 235 aa19.47■□□□□ 0.71
PSPC1-201ENST00000338910 HEXIM2Q96MH2 286 aaKnown RBP19.47■□□□□ 0.71
PSPC1-201ENST00000338910 ZIC5Q96T25 663 aa19.47■□□□□ 0.71
PSPC1-201ENST00000338910 ARMCX1Q9P291 453 aa19.47■□□□□ 0.71
PSPC1-201ENST00000338910 CILPO75339 1184 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 MYL2P10916 166 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 ATICP31939 592 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 CDK7P50613 346 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 BEX3Q00994 111 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 PTPN11Q06124 597 aaPredicted RBP19.46■□□□□ 0.71
PSPC1-201ENST00000338910 OASLQ15646 514 aaKnown RBP19.46■□□□□ 0.71
PSPC1-201ENST00000338910 NET1Q7Z628 596 aaPredicted RBP19.46■□□□□ 0.71
PSPC1-201ENST00000338910 SDCCAG8Q86SQ7 713 aaPredicted RBP19.46■□□□□ 0.71
PSPC1-201ENST00000338910 ZNF410Q86VK4 478 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 MYLK4Q86YV6 388 aaPredicted RBP19.46■□□□□ 0.71
PSPC1-201ENST00000338910 TMPRSS6Q8IU80 811 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 CCDC110Q8TBZ0 833 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 DCAKDQ8WVC6 231 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 CPXM1Q96SM3 734 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 LHX5Q9H2C1 402 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 ZFYVE28Q9HCC9 887 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 RNF19AQ9NV58 838 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 RRN3P2A6NIE6 340 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 FAM155AB1AL88 458 aaPredicted RBP19.46■□□□□ 0.71
PSPC1-201ENST00000338910 GOLGA8MH3BSY2 632 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 IL1BP01584 269 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 CTGFP29279 349 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 HOXA11P31270 313 aaPredicted RBP19.46■□□□□ 0.71
PSPC1-201ENST00000338910 PHBP35232 272 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 RGS2P41220 211 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 HIC1Q14526 733 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 KYAT1Q16773 422 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 PABPC1LQ4VXU2 614 aaKnown RBP19.46■□□□□ 0.71
PSPC1-201ENST00000338910 ATP11CQ8NB49 1132 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 SMC1BQ8NDV3 1235 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 SLITRK1Q96PX8 696 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 ADAMTS10Q9H324 1103 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 OCEL1Q9H607 264 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 DNAJB4Q9UDY4 337 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 FARP1Q9Y4F1 1045 aaPredicted RBP19.46■□□□□ 0.71
PSPC1-201ENST00000338910 HES2Q9Y543 173 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 CEP350Q5VT06 3117 aa19.46■□□□□ 0.71
PSPC1-201ENST00000338910 B2RBV5 119 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 KRT3P12035 628 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 ATF7P17544 494 aaPredicted RBP19.45■□□□□ 0.7
PSPC1-201ENST00000338910 CPA2P48052 419 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 PSMC1P62191 440 aaKnown RBP19.45■□□□□ 0.7
PSPC1-201ENST00000338910 RBP5P82980 135 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 TRMT5Q32P41 509 aaKnown RBP19.45■□□□□ 0.7
PSPC1-201ENST00000338910 MFSD7Q6UXD7 560 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 CATSPER4Q7RTX7 472 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 RCOR2Q8IZ40 523 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 FBXO27Q8NI29 283 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 PYROXD1Q8WU10 500 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 OSMRQ99650 979 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 PCDH9Q9HC56 1237 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 SNTG2Q9NY99 539 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 NRCAMQ92823 1304 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 CAPN14A8MX76 684 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 KRT1P04264 644 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 P4HA1P13674 534 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 RANBP1P43487 201 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 VCPP55072 806 aaKnown RBP19.45■□□□□ 0.7
PSPC1-201ENST00000338910 GAD2Q05329 585 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 CDC16Q13042 620 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 PIGHQ14442 188 aaPredicted RBP19.45■□□□□ 0.7
PSPC1-201ENST00000338910 KLHL38Q2WGJ6 581 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 MSS51Q4VC12 460 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 RIPOR1Q6ZS17 1223 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 JOSD2Q8TAC2 188 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 PANX3Q96QZ0 392 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 WDR83Q9BRX9 315 aaKnown RBP19.45■□□□□ 0.7
PSPC1-201ENST00000338910 STRIP2Q9ULQ0 834 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 PLA2G4CQ9UP65 541 aa19.45■□□□□ 0.7
PSPC1-201ENST00000338910 H3BRJ5 948 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 NDC80O14777 642 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 ACTR3P61158 418 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 MFSD10Q14728 455 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 ARMC3Q5W041 872 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 C3orf62Q6ZUJ4 267 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 ALYREFQ86V81 257 aaKnown RBP19.44■□□□□ 0.7
PSPC1-201ENST00000338910 SCUBE1Q8IWY4 988 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 RBM15BQ8NDT2 890 aaKnown RBP19.44■□□□□ 0.7
PSPC1-201ENST00000338910 UBA3Q8TBC4 463 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 NKD2Q969F2 451 aaPredicted RBP19.44■□□□□ 0.7
PSPC1-201ENST00000338910 CENPKQ9BS16 269 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 EIF2AQ9BY44 585 aaKnown RBP19.44■□□□□ 0.7
PSPC1-201ENST00000338910 GCOM2Q9BZD3 368 aaPredicted RBP19.44■□□□□ 0.7
PSPC1-201ENST00000338910 VRTNQ9H8Y1 702 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 ZWILCHQ9H900 591 aa19.44■□□□□ 0.7
PSPC1-201ENST00000338910 CYP3A43Q9HB55 503 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms