RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 ARHGAP15Q53QZ3 475 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 DCAF6Q58WW2 860 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 MSANTD2Q6P1R3 559 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 DNAJC24Q6P3W2 148 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 TMTC1Q8IUR5 882 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 TDRD5Q8NAT2 981 aaKnown RBP13.12□□□□□ -0.31
PRIM1-201ENST00000338193 C3orf20Q8ND61 904 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 ASIC4Q96FT7 647 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 P2RY11Q96G91 374 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 MCEEQ96PE7 176 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 PPP1R9BQ96SB3 815 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 TBCBQ99426 244 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 POPDC2Q9HBU9 364 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 TMPRSS4Q9NRS4 437 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 ABCC13Q9NSE7 274 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.12□□□□□ -0.312e-7■□□□□ 9
PRIM1-201ENST00000338193 EPS15L1Q9UBC2 864 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 SALL4Q9UJQ4 1053 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 EPN1Q9Y6I3 576 aaPredicted RBP13.12□□□□□ -0.31
PRIM1-201ENST00000338193 COL4A2P08572 1712 aa13.12□□□□□ -0.31
PRIM1-201ENST00000338193 SYNJ2BP-COX16A0A087WUM0 186 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 C2CD4BA6NLJ0 364 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 EIF3CLB5ME19 914 aaKnown RBP13.11□□□□□ -0.31
PRIM1-201ENST00000338193 I6L893 689 aaPredicted RBP13.11□□□□□ -0.31
PRIM1-201ENST00000338193 HSF2BPO75031 334 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 IGLV3-25P01717 112 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 KLKB1P03952 638 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 MBL2P11226 248 aaPredicted RBP13.11□□□□□ -0.31
PRIM1-201ENST00000338193 PPP3CCP48454 512 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 TUBP50607 506 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 SLC7A9P82251 487 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 EIF4EBP2Q13542 120 aaPredicted RBP13.11□□□□□ -0.31
PRIM1-201ENST00000338193 GRM2Q14416 872 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 CCDC14Q49A88 953 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 EFHC1Q5JVL4 640 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 VITQ6UXI7 678 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 VPS36Q86VN1 386 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 SH3RF2Q8TEC5 729 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 ATXN2LQ8WWM7 1075 aaKnown RBP13.11□□□□□ -0.31
PRIM1-201ENST00000338193 RXFP2Q8WXD0 754 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 SMARCD2Q92925 531 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 ZFYVE19Q96K21 471 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 NPY6RQ99463 290 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 EIF3CQ99613 913 aaKnown RBP13.11□□□□□ -0.31
PRIM1-201ENST00000338193 SELENOOQ9BVL4 669 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 MAGEB5Q9BZ81 275 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 OSGEPQ9NPF4 335 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 ASNSD1Q9NWL6 643 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 GDE1Q9NZC3 331 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 MARCH2Q9P0N8 246 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 COX16Q9P0S2 106 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 TRIM10Q9UDY6 481 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 LIMD1Q9UGP4 676 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 NUMBLQ9Y6R0 609 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 DUSP10Q9Y6W6 482 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 TRIOO75962 3097 aa13.11□□□□□ -0.31
PRIM1-201ENST00000338193 SLC12A8A0AV02 714 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 SIGLEC16A6NMB1 481 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 ANHXE9PGG2 379 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 LEFTY2O00292 366 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 CYP1A2P05177 515 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 RALAP11233 206 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 KRT3P12035 628 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 DDX6P26196 483 aaKnown RBP eCLIP13.1□□□□□ -0.31
PRIM1-201ENST00000338193 ATP5C1P36542 298 aaKnown RBP13.1□□□□□ -0.31
PRIM1-201ENST00000338193 SCNN1AP37088 669 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 MATKP42679 507 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 USP4Q13107 963 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 ZNF77Q15935 545 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 RSRC2Q7L4I2 434 aaKnown RBP13.1□□□□□ -0.31
PRIM1-201ENST00000338193 OTOP3Q7RTS5 596 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 BNIPLQ7Z465 357 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 ZDHHC17Q8IUH5 632 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 CCDC170Q8IYT3 715 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 ARHGAP18Q8N392 663 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 ARFGAP1Q8N6T3 406 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 MSANTD4Q8NCY6 345 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 VCPIP1Q96JH7 1222 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 DDX23Q9BUQ8 820 aaKnown RBP13.1□□□□□ -0.31
PRIM1-201ENST00000338193 LACRTQ9GZZ8 138 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 TRPV4Q9HBA0 871 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 PIGVQ9NUD9 493 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 TDP1Q9NUW8 608 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.1□□□□□ -0.31
PRIM1-201ENST00000338193 CFAP97Q9P2B7 532 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 XPO7Q9UIA9 1087 aaKnown RBP13.1□□□□□ -0.31
PRIM1-201ENST00000338193 DNMT3LQ9UJW3 386 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 ARHGAP26Q9UNA1 814 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 PCDHA13Q9Y5I0 950 aa13.1□□□□□ -0.31
PRIM1-201ENST00000338193 ANKRD62A6NC57 917 aa13.09□□□□□ -0.31
PRIM1-201ENST00000338193 TMEM191CA6NGB0 347 aa13.09□□□□□ -0.31
PRIM1-201ENST00000338193 HEPACAM2A8MVW5 462 aa13.09□□□□□ -0.31
PRIM1-201ENST00000338193 IRAK2O43187 625 aa13.09□□□□□ -0.31
PRIM1-201ENST00000338193 CCP110O43303 1012 aa13.09□□□□□ -0.31
PRIM1-201ENST00000338193 NARSO43776 548 aaKnown RBP13.09□□□□□ -0.31
PRIM1-201ENST00000338193 STC2O76061 302 aa13.09□□□□□ -0.31
PRIM1-201ENST00000338193 TRUB2O95900 331 aaKnown RBP13.09□□□□□ -0.31
PRIM1-201ENST00000338193 GLI1P08151 1106 aa13.09□□□□□ -0.31
PRIM1-201ENST00000338193 H2AFZP0C0S5 128 aa13.09□□□□□ -0.31
PRIM1-201ENST00000338193 TMEM253P0C7T8 217 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms