RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 EPN1Q9Y6I3 576 aaPredicted RBP16.04■□□□□ 0.16
SEC13-201ENST00000337354 DOCK8Q8NF50 2099 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 SLC12A8A0AV02 714 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 FAM170AA1A519 330 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 EIF3CLB5ME19 914 aaKnown RBP16.03■□□□□ 0.16
SEC13-201ENST00000337354 SLC9A3R1O14745 358 aaPredicted RBP16.03■□□□□ 0.16
SEC13-201ENST00000337354 MDM4O15151 490 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 CHADO15335 359 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 IPO7O95373 1038 aaKnown RBP16.03■□□□□ 0.16
SEC13-201ENST00000337354 TRUB2O95900 331 aaKnown RBP16.03■□□□□ 0.16
SEC13-201ENST00000337354 GALCP54803 685 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 RING1Q06587 406 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 USP4Q13107 963 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 MTA1Q13330 715 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 EIF4EBP2Q13542 120 aaPredicted RBP16.03■□□□□ 0.16
SEC13-201ENST00000337354 MTF1Q14872 753 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 TRIP4Q15650 581 aaPredicted RBP16.03■□□□□ 0.16
SEC13-201ENST00000337354 ARHGAP29Q52LW3 1261 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 PPP1R15BQ5SWA1 713 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 DCUN1D2Q6PH85 259 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 PHLDB2Q86SQ0 1253 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 RNF135Q8IUD6 432 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 UNC45BQ8IWX7 931 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 CCDC112Q8NEF3 446 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 RSAD2Q8WXG1 361 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 CTNNBL1Q8WYA6 563 aaPredicted RBP16.03■□□□□ 0.16
SEC13-201ENST00000337354 ZNF653Q96CK0 615 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 RSPRY1Q96DX4 576 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 PGAP3Q96FM1 320 aaPredicted RBP16.03■□□□□ 0.16
SEC13-201ENST00000337354 LRRC3BQ96PB8 259 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 NPY6RQ99463 290 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 EIF3CQ99613 913 aaKnown RBP16.03■□□□□ 0.16
SEC13-201ENST00000337354 KXD1Q9BQD3 176 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 RPP25Q9BUL9 199 aaKnown RBP16.03■□□□□ 0.16
SEC13-201ENST00000337354 PLA2G2FQ9BZM2 168 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 SPTLC3Q9NUV7 552 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 CFAP97Q9P2B7 532 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 TBC1D14Q9P2M4 693 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 MUTYHQ9UIF7 546 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 LSM7Q9UK45 103 aaKnown RBP16.03■□□□□ 0.16
SEC13-201ENST00000337354 ZNF510Q9Y2H8 683 aa16.03■□□□□ 0.16
SEC13-201ENST00000337354 BDP1A6H8Y1 2624 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 C2CD4BA6NLJ0 364 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 ZNF263O14978 683 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 NRDCO43847 1150 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 NDUFA10O95299 355 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 IGLV3-25P01717 112 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 CYP1A2P05177 515 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 SLC2A3P11169 496 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 PDGFRAP16234 1089 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 DESP17661 470 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 ABCB4P21439 1286 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 SDC4P31431 198 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 RFC1P35251 1148 aaPredicted RBP16.02■□□□□ 0.16
SEC13-201ENST00000337354 FLT3P36888 993 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 HARS2P49590 506 aaKnown RBP16.02■□□□□ 0.16
SEC13-201ENST00000337354 NUGGCQ68CJ6 796 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 TMEM139Q8IV31 216 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 LRRC8AQ8IWT6 810 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 RXFP2Q8WXD0 754 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 IRF7Q92985 503 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 OTUB2Q96DC9 234 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 THAP2Q9H0W7 228 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 TRPV5Q9NQA5 729 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.02■□□□□ 0.167e-6■□□□□ 8.9
SEC13-201ENST00000337354 SORCS3Q9UPU3 1222 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 PAXBP1Q9Y5B6 917 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 NOTCH4Q99466 2003 aa16.02■□□□□ 0.16
SEC13-201ENST00000337354 TMEM191CA6NGB0 347 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 SOWAHDA6NJG2 315 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 M0QYT0 321 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 IRAK2O43187 625 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 DCXO43602 365 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 STC2O76061 302 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 ENDOD1O94919 500 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 IGLV3-27P01718 113 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 ASGR2P07307 311 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 TMEM253P0C7T8 217 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 MAGEA1P43355 309 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 PTPN9P43378 593 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 ZNF143P52747 638 aaPredicted RBP16.01■□□□□ 0.15
SEC13-201ENST00000337354 TBX4P57082 545 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 PDGFRLQ15198 375 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 TAC4Q86UU9 113 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 DNAAF5Q86Y56 855 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 JOSD2Q8TAC2 188 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 FNIP1Q8TF40 1166 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 OSCP1Q8WVF1 389 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 AZIN2Q96A70 460 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 SLC39A13Q96H72 371 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 PDLIM2Q96JY6 352 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 FAM204AQ9H8W3 233 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 DDIT4Q9NX09 232 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 SLC12A6Q9UHW9 1150 aa16.01■□□□□ 0.15
SEC13-201ENST00000337354 GREM1O60565 184 aa16■□□□□ 0.15
SEC13-201ENST00000337354 LATS1O95835 1130 aa16■□□□□ 0.15
SEC13-201ENST00000337354 SRFP11831 508 aa16■□□□□ 0.15
SEC13-201ENST00000337354 GPD1P21695 349 aa16■□□□□ 0.15
SEC13-201ENST00000337354 CCR1P32246 355 aa16■□□□□ 0.15
SEC13-201ENST00000337354 SULT1E1P49888 294 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms