RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 PTPN7P35236 360 aa9.18□□□□□ -0.94
SNCA-201ENST00000336904 PCK1P35558 622 aa9.18□□□□□ -0.94
SNCA-201ENST00000336904 TAF6P49848 677 aa9.18□□□□□ -0.94
SNCA-201ENST00000336904 BST2Q10589 180 aaKnown RBP9.18□□□□□ -0.94
SNCA-201ENST00000336904 KCNJ11Q14654 390 aa9.18□□□□□ -0.94
SNCA-201ENST00000336904 TAZQ16635 292 aa9.18□□□□□ -0.94
SNCA-201ENST00000336904 FSCN1Q16658 493 aaKnown RBP9.18□□□□□ -0.94
SNCA-201ENST00000336904 TMEM110Q86TL2 294 aa9.18□□□□□ -0.94
SNCA-201ENST00000336904 PDCD7Q8N8D1 485 aaKnown RBP9.18□□□□□ -0.94
SNCA-201ENST00000336904 USP6NLQ92738 828 aa9.18□□□□□ -0.94
SNCA-201ENST00000336904 MAGEB18Q96M61 343 aa9.18□□□□□ -0.94
SNCA-201ENST00000336904 TMEM209Q96SK2 561 aa9.18□□□□□ -0.94
SNCA-201ENST00000336904 MYLK2Q9H1R3 596 aa9.18□□□□□ -0.94
SNCA-201ENST00000336904 PIGVQ9NUD9 493 aa9.18□□□□□ -0.94
SNCA-201ENST00000336904 DDX43Q9NXZ2 648 aaKnown RBP9.18□□□□□ -0.94
SNCA-201ENST00000336904 DTLQ9NZJ0 730 aa9.18□□□□□ -0.94
SNCA-201ENST00000336904 HAO1Q9UJM8 370 aa9.18□□□□□ -0.94
SNCA-201ENST00000336904 UBQLN1Q9UMX0 589 aaKnown RBP9.18□□□□□ -0.94
SNCA-201ENST00000336904 L3MBTL1Q9Y468 752 aa9.18□□□□□ -0.94
SNCA-201ENST00000336904 COL1A2P08123 1366 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 C17orf102A2RUQ5 167 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 EIF4E1BA6NMX2 242 aaKnown RBP9.17□□□□□ -0.94
SNCA-201ENST00000336904 YJEFN3A6XGL0 299 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 E7ENQ6 273 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 TNPO2O14787 897 aaKnown RBP9.17□□□□□ -0.94
SNCA-201ENST00000336904 KRT16P08779 473 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 BRCC3P46736 316 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 NCALDP61601 193 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 PLEKHG4Q58EX7 1191 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 EFHC2Q5JST6 749 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 PAQR9Q6ZVX9 377 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 OTOAQ7RTW8 1153 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 KDELC2Q7Z4H8 507 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 MAP7D3Q8IWC1 876 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 TRPV1Q8NER1 839 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 TTC25Q96NG3 672 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 AP5M1Q9H0R1 490 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 ACSS3Q9H6R3 686 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 PCMTD2Q9NV79 361 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 CNTN3Q9P232 1028 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 CDY2AQ9Y6F7 541 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 CDH23Q9H251 3354 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 WDR27A2RRH5 827 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 PIRO00625 290 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 TYROBPO43914 113 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 LPXNO60711 386 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 CPP00450 1065 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 OAS1P00973 400 aaKnown RBP9.17□□□□□ -0.94
SNCA-201ENST00000336904 MT-ND3P03897 115 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 ABHD2P08910 425 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 GHRP10912 638 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 GBP2P32456 591 aaPredicted RBP9.17□□□□□ -0.94
SNCA-201ENST00000336904 TKTL1P51854 596 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 BCAT1P54687 386 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 CAP1Q01518 475 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 POU5F1BQ06416 359 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 TFDP2Q14188 446 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 NCBP2-AS2Q69YL0 99 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 GDF6Q6KF10 455 aaPredicted RBP9.17□□□□□ -0.94
SNCA-201ENST00000336904 C16orf46Q6P387 395 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 ALKAL1Q6UXT8 129 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 YTHDF3Q7Z739 585 aaKnown RBP9.17□□□□□ -0.94
SNCA-201ENST00000336904 CROCCP2Q86T23 111 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 SPATS2Q86XZ4 545 aaKnown RBP9.17□□□□□ -0.94
SNCA-201ENST00000336904 ANKRD52Q8NB46 1076 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 DENND1AQ8TEH3 1009 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 MOCOSQ96EN8 888 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 CELF6Q96J87 481 aaKnown RBP9.17□□□□□ -0.94
SNCA-201ENST00000336904 ULBP1Q9BZM6 244 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 MAF1Q9H063 256 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 AGO3Q9H9G7 860 aaKnown RBP9.17□□□□□ -0.94
SNCA-201ENST00000336904 CRTAC1Q9NQ79 661 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 ST3GAL5Q9UNP4 418 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.17□□□□□ -0.94
SNCA-201ENST00000336904 ZSWIM8A7E2V4 1837 aa9.17□□□□□ -0.94
SNCA-201ENST00000336904 CAPN9O14815 690 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 ENDOD1O94919 500 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 ITGB1P05556 798 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 OR4Q2P0C623 313 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 PHBP35232 272 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 CACNB2Q08289 660 aaPredicted RBP9.16□□□□□ -0.94
SNCA-201ENST00000336904 EML3Q32P44 896 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 NBPF20Q3BBV1 942 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 SDHAF4Q5VUM1 108 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 OTUD1Q5VV17 481 aaPredicted RBP9.16□□□□□ -0.94
SNCA-201ENST00000336904 PNPLA1Q8N8W4 532 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 USP33Q8TEY7 942 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 ZNF75CPQ92670 426 aaPredicted RBP9.16□□□□□ -0.94
SNCA-201ENST00000336904 CCDC134Q9H6E4 229 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 LRRC4Q9HBW1 653 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 FBXO6Q9NRD1 293 aaPredicted RBP9.16□□□□□ -0.94
SNCA-201ENST00000336904 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.16□□□□□ -0.94
SNCA-201ENST00000336904 KLHL14Q9P2G3 628 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 GABRQQ9UN88 632 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 TEX264Q9Y6I9 313 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 SMIM35A0A1B0GVV1 85 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 RRN3P2A6NIE6 340 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 TCEA3O75764 348 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 RASSF9O75901 435 aa9.16□□□□□ -0.94
SNCA-201ENST00000336904 PTPN1P18031 435 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms