RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 CBLBQ13191 982 aa20.63■□□□□ 0.89
CDCA4-201ENST00000336219 FAM91A1Q658Y4 838 aa20.63■□□□□ 0.89
CDCA4-201ENST00000336219 MTHFD1LQ6UB35 978 aa20.63■□□□□ 0.89
CDCA4-201ENST00000336219 NUDCD3Q8IVD9 361 aa20.63■□□□□ 0.89
CDCA4-201ENST00000336219 RXFP2Q8WXD0 754 aa20.63■□□□□ 0.89
CDCA4-201ENST00000336219 CYP3A43Q9HB55 503 aa20.63■□□□□ 0.89
CDCA4-201ENST00000336219 USP29Q9HBJ7 922 aa20.63■□□□□ 0.89
CDCA4-201ENST00000336219 NDE1Q9NXR1 346 aa20.63■□□□□ 0.89
CDCA4-201ENST00000336219 ANKRD33BA6NCL7 494 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 CSH1P0DML2 217 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 CSH2P0DML3 217 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 ACTR3P61158 418 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 CDC16Q13042 620 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 C15orf59Q2T9L4 293 aaPredicted RBP20.62■□□□□ 0.89
CDCA4-201ENST00000336219 EFCAB12Q6NXP0 572 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 HEXIM2Q96MH2 286 aaKnown RBP20.62■□□□□ 0.89
CDCA4-201ENST00000336219 C7orf26Q96N11 449 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 RNF157Q96PX1 679 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 VRTNQ9H8Y1 702 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 PNPLA8Q9NP80 782 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 F8W8V4 182 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 SOCS7O14512 581 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 IL1BP01584 269 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 SNRPAP09012 282 aaKnown RBP20.62■□□□□ 0.89
CDCA4-201ENST00000336219 STAG3L1P0CL83 205 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 SLC25A3Q00325 362 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 MROH9Q5TGP6 573 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 TRMT10BQ6PF06 316 aaKnown RBP20.62■□□□□ 0.89
CDCA4-201ENST00000336219 DPH6Q7L8W6 267 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 RNF217Q8TC41 542 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 PYDC1Q8WXC3 89 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 USP6NLQ92738 828 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 MTBPQ96DY7 904 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 PIWIL1Q96J94 861 aaKnown RBP20.62■□□□□ 0.89
CDCA4-201ENST00000336219 R3HDMLQ9H3Y0 253 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 EBF3Q9H4W6 596 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 DDX43Q9NXZ2 648 aaKnown RBP20.62■□□□□ 0.89
CDCA4-201ENST00000336219 PAK5Q9P286 719 aa20.62■□□□□ 0.89
CDCA4-201ENST00000336219 ZC3H7BQ9UGR2 993 aaKnown RBP20.62■□□□□ 0.89
CDCA4-201ENST00000336219 RNASEH1O60930 286 aaKnown RBP20.61■□□□□ 0.89
CDCA4-201ENST00000336219 C6orf222P0C671 652 aaPredicted RBP20.61■□□□□ 0.89
CDCA4-201ENST00000336219 PDGFRAP16234 1089 aa20.61■□□□□ 0.89
CDCA4-201ENST00000336219 ATICP31939 592 aa20.61■□□□□ 0.89
CDCA4-201ENST00000336219 PDE1BQ01064 536 aa20.61■□□□□ 0.89
CDCA4-201ENST00000336219 MAP1SQ66K74 1059 aaPredicted RBP20.61■□□□□ 0.89
CDCA4-201ENST00000336219 POU5F2Q8N7G0 328 aa20.61■□□□□ 0.89
CDCA4-201ENST00000336219 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.61■□□□□ 0.89
CDCA4-201ENST00000336219 ZFAND2BQ8WV99 257 aa20.61■□□□□ 0.89
CDCA4-201ENST00000336219 POPDC2Q9HBU9 364 aa20.61■□□□□ 0.89
CDCA4-201ENST00000336219 HBS1LQ9Y450 684 aaKnown RBP20.61■□□□□ 0.89
CDCA4-201ENST00000336219 POLR2AP24928 1970 aaKnown RBP20.61■□□□□ 0.89
CDCA4-201ENST00000336219 KLHL33A6NCF5 533 aa20.61■□□□□ 0.89
CDCA4-201ENST00000336219 KCNN4O15554 427 aa20.61■□□□□ 0.89
CDCA4-201ENST00000336219 PRPSAP2O60256 369 aa20.61■□□□□ 0.89
CDCA4-201ENST00000336219 LYPLA1O75608 230 aaPredicted RBP20.61■□□□□ 0.89
CDCA4-201ENST00000336219 CDO1Q16878 200 aa20.61■□□□□ 0.89
CDCA4-201ENST00000336219 TRMT5Q32P41 509 aaKnown RBP20.61■□□□□ 0.89
CDCA4-201ENST00000336219 FAM183BPQ6ZVS7 135 aa20.61■□□□□ 0.89
CDCA4-201ENST00000336219 SHCBP1LQ9BZQ2 653 aa20.61■□□□□ 0.89
CDCA4-201ENST00000336219 WWP1Q9H0M0 922 aa20.61■□□□□ 0.89
CDCA4-201ENST00000336219 SIRPGQ9P1W8 387 aa20.61■□□□□ 0.89
CDCA4-201ENST00000336219 MCM3APO60318 1980 aa20.61■□□□□ 0.89
CDCA4-201ENST00000336219 USP2O75604 605 aaPredicted RBP20.6■□□□□ 0.89
CDCA4-201ENST00000336219 RTN3O95197 1032 aaPredicted RBP20.6■□□□□ 0.89
CDCA4-201ENST00000336219 CYP3A5P20815 502 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 AP2B1P63010 937 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 VGLL4Q14135 290 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 OR6B2Q6IFH4 312 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 CAND1Q86VP6 1230 aaKnown RBP20.6■□□□□ 0.89
CDCA4-201ENST00000336219 CCDC33Q8N5R6 958 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 PLD5Q8N7P1 536 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 SPATA33Q96N06 139 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 GPATCH2LQ9NWQ4 482 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 PPP2R3BQ9Y5P8 575 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 HMX2A2RU54 273 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 KRT37O76014 449 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 P4HA1P13674 534 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 IL4RP24394 825 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 GSTT1P30711 240 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 KRT81Q14533 505 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 SMAD1Q15797 465 aaKnown RBP20.6■□□□□ 0.89
CDCA4-201ENST00000336219 RALGPS1Q5JS13 557 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 ATG16L1Q676U5 607 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 RNF111Q6ZNA4 994 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 CRLF3Q8IUI8 442 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 NDUFAF2Q8N183 169 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 MPP5Q8N3R9 675 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 RTP4Q96DX8 246 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 APOL6Q9BWW8 343 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 PRMT7Q9NVM4 692 aaPredicted RBP20.6■□□□□ 0.89
CDCA4-201ENST00000336219 PDP2Q9P2J9 529 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 HEY1Q9Y5J3 304 aa20.6■□□□□ 0.89
CDCA4-201ENST00000336219 A0A088AWK7 358 aa20.59■□□□□ 0.89
CDCA4-201ENST00000336219 BUD23O43709 281 aaKnown RBP20.59■□□□□ 0.89
CDCA4-201ENST00000336219 GRAP2O75791 330 aa20.59■□□□□ 0.89
CDCA4-201ENST00000336219 APRTP07741 180 aa20.59■□□□□ 0.89
CDCA4-201ENST00000336219 ETS2P15036 469 aa20.59■□□□□ 0.89
CDCA4-201ENST00000336219 RBL1P28749 1068 aa20.59■□□□□ 0.89
CDCA4-201ENST00000336219 C16orf46Q6P387 395 aa20.59■□□□□ 0.89
CDCA4-201ENST00000336219 EFCAB3Q8N7B9 438 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms