RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 T-ENOLP0DO92 83 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 CYP2C9P11712 490 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 DARSP14868 501 aaKnown RBP18.33■□□□□ 0.53
LRCH3-201ENST00000334859 CCND1P24385 295 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 LGSNQ5TDP6 509 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 C4orf22Q6V702 233 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 MPP5Q8N3R9 675 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 MCUQ8NE86 351 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 CENPIQ92674 756 aaPredicted RBP18.33■□□□□ 0.53
LRCH3-201ENST00000334859 LRRC39Q96DD0 335 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 L3MBTL3Q96JM7 780 aaPredicted RBP18.33■□□□□ 0.53
LRCH3-201ENST00000334859 ZNF560Q96MR9 790 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 C11orf84Q9BUA3 381 aaPredicted RBP18.33■□□□□ 0.53
LRCH3-201ENST00000334859 UGT1A7Q9HAW7 530 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 UGT1A10Q9HAW8 530 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 UGT1A8Q9HAW9 530 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 GOLGA2P5Q9HBQ8 144 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 SMYD2Q9NRG4 433 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 MTMR10Q9NXD2 777 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 KANSL3Q9P2N6 904 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 MFHAS1Q9Y4C4 1052 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 NR2E3Q9Y5X4 410 aa18.33■□□□□ 0.53
LRCH3-201ENST00000334859 TRDMT1O14717 391 aaKnown RBP18.33■□□□□ 0.52
LRCH3-201ENST00000334859 GCATO75600 419 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 CSH1P0DML2 217 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 CSH2P0DML3 217 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 GOT1P17174 413 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 PRKCHP24723 683 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 NR2C2P49116 596 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 PARP6Q2NL67 630 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 CDHR3Q6ZTQ4 885 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 DENND5BQ6ZUT9 1274 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 ZNF534Q76KX8 674 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 FAM131BQ86XD5 332 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 PYROXD2Q8N2H3 581 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 APPL2Q8NEU8 664 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 FAM149B1Q96BN6 582 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.33■□□□□ 0.52
LRCH3-201ENST00000334859 NOP53Q9NZM5 478 aaKnown RBP18.33■□□□□ 0.52
LRCH3-201ENST00000334859 ZNF180Q9UJW8 692 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 NUMBLQ9Y6R0 609 aa18.33■□□□□ 0.52
LRCH3-201ENST00000334859 SMIM28A0A1B0GU29 152 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 DYNC1LI2O43237 492 aaPredicted RBP18.32■□□□□ 0.52
LRCH3-201ENST00000334859 ANP32DO95626 131 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 CD4P01730 458 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 AMPD1P23109 780 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 ARFIP2P53365 341 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 GRB14Q14449 540 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 PRKD1Q15139 912 aaPredicted RBP18.32■□□□□ 0.52
LRCH3-201ENST00000334859 TRMT10BQ6PF06 316 aaKnown RBP18.32■□□□□ 0.52
LRCH3-201ENST00000334859 ALKAL1Q6UXT8 129 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 GSDMBQ8TAX9 411 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 SLC7A6OSQ96CW6 309 aaPredicted RBP18.32■□□□□ 0.52
LRCH3-201ENST00000334859 TBC1D10AQ9BXI6 508 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 SLC13A1Q9BZW2 595 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 DTLQ9NZJ0 730 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 HEY2Q9UBP5 337 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 SYNJ2BP-COX16A0A087WUM0 186 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 DCAF8L1A6NGE4 600 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 KRT38O76015 456 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 TPSB2P20231 275 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 EPHB2P29323 1055 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 ARL4AP40617 200 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 GRIA1P42261 906 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 ZBTB16Q05516 673 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 TPSAB1Q15661 275 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 NCBP2-AS2Q69YL0 99 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 LONP2Q86WA8 852 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 BRI3BPQ8WY22 251 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 TMEM120AQ9BXJ8 343 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 EBF2Q9HAK2 575 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 COX16Q9P0S2 106 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 MORF4L1Q9UBU8 362 aa18.32■□□□□ 0.52
LRCH3-201ENST00000334859 PIRO00625 290 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 HAUS5O94927 633 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 MAGEA3P43357 314 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 ACADSBP45954 432 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 SULT1E1P49888 294 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 CDC42EP1Q00587 391 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 ADIGQ0VDE8 80 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 CBLBQ13191 982 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 ADGRF2Q8IZF7 708 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 CRYBG2Q8N1P7 616 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 DEPDC1BQ8WUY9 529 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 TFB1MQ8WVM0 346 aaKnown RBP18.31■□□□□ 0.52
LRCH3-201ENST00000334859 DNAJB3Q8WWF6 145 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 NDRG1Q92597 394 aaKnown RBP18.31■□□□□ 0.52
LRCH3-201ENST00000334859 MS4A4AQ96JQ5 239 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 SIGLEC10Q96LC7 697 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 EBNA1BP2Q99848 306 aaKnown RBP18.31■□□□□ 0.52
LRCH3-201ENST00000334859 MECRQ9BV79 373 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 XAB2Q9HCS7 855 aaKnown RBP18.31■□□□□ 0.52
LRCH3-201ENST00000334859 PCMTD2Q9NV79 361 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 NRCAMQ92823 1304 aa18.31■□□□□ 0.52
LRCH3-201ENST00000334859 CCDC195A0A1B0GUA6 201 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 I3L4J1 428 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 RPSAP08865 295 aaKnown RBP18.3■□□□□ 0.52
LRCH3-201ENST00000334859 TKTP29401 623 aaKnown RBP18.3■□□□□ 0.52
LRCH3-201ENST00000334859 TAF6P49848 677 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 SPDYAQ5MJ70 313 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms