RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 VWA2Q5GFL6 755 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 LIN9Q5TKA1 542 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 SLC27A1Q6PCB7 646 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 WASH2PQ6VEQ5 465 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 C20orf204Q6ZNR8 217 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 OTOAQ7RTW8 1153 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ADGRA1Q86SQ6 560 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 CDH24Q86UP0 819 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 FBXO16Q8IX29 292 aaPredicted RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 C8orf58Q8NAV2 365 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ELOA3Q8NG57 546 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 EPS8L1Q8TE68 723 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 RAD54LQ92698 747 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 HAS1Q92839 578 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 HPS1Q92902 700 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 HSPA12BQ96MM6 686 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 FNBP1Q96RU3 617 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ARHGAP9Q9BRR9 750 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 KRTAP9-3Q9BYQ3 159 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 AGXT2Q9BYV1 514 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 KRT23Q9C075 422 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 SLC6A16Q9GZN6 736 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 PHAXQ9H814 394 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 WASH6PQ9NQA3 447 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 NPDC1Q9NQX5 325 aaPredicted RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ASAH2Q9NR71 780 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ZBTB40Q9NUA8 1239 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 TMLHEQ9NVH6 421 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 ASNSD1Q9NWL6 643 aa1.7□□□□□ -2.14
LINC00643-201ENST00000334389 SIDT1Q9NXL6 827 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 RRP7AQ9Y3A4 280 aaKnown RBP1.7□□□□□ -2.14
LINC00643-201ENST00000334389 PTPRZ1P23471 2315 aaPredicted RBP1.69□□□□□ -2.14
LINC00643-201ENST00000334389 SPAG17Q6Q759 2223 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 LOC105371045A0A1W2PR82 267 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 RGSL1A5PLK6 1076 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 HEPACAM2A8MVW5 462 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 GABRDO14764 452 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 NRP1O14786 923 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 EIF5BO60841 1220 aaKnown RBP1.69□□□□□ -2.14
LINC00643-201ENST00000334389 PHF2O75151 1096 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 EPXP11678 715 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 DRD2P14416 443 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 WARSP23381 471 aaKnown RBP1.69□□□□□ -2.14
LINC00643-201ENST00000334389 TPP2P29144 1249 aaPredicted RBP1.69□□□□□ -2.14
LINC00643-201ENST00000334389 TRHRP34981 398 aaPredicted RBP1.69□□□□□ -2.14
LINC00643-201ENST00000334389 STAT1P42224 750 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 ABL2P42684 1182 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 SOX9P48436 509 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 POLE2P56282 527 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 NLRP12P59046 1061 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 PSMC6P62333 389 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 GPC5P78333 572 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 MRPS9P82933 396 aaKnown RBP1.69□□□□□ -2.14
LINC00643-201ENST00000334389 CYP4A11Q02928 519 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 MAPK7Q13164 816 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 NR0B2Q15466 257 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 KRTCAP3Q53RY4 240 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 ADGRF1Q5T601 910 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 ZNF280DQ6N043 979 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 H3F3CQ6NXT2 135 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 RGS9BPQ6ZS82 235 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 MIGA2Q7L4E1 593 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 EXOC3L1Q86VI1 746 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 TMEM173Q86WV6 379 aaPredicted RBP1.69□□□□□ -2.14
LINC00643-201ENST00000334389 SLC41A1Q8IVJ1 513 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 ARHGAP18Q8N392 663 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 CPSF7Q8N684 471 aaKnown RBP1.69□□□□□ -2.14
LINC00643-201ENST00000334389 ESX1Q8N693 406 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 TSTD1Q8NFU3 115 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 BICD2Q8TD16 824 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 MICAL1Q8TDZ2 1067 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 SHC3Q92529 594 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 BTBD6Q96KE9 485 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 SPATA33Q96N06 139 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 FERD3LQ96RJ6 166 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 ELF4Q99607 663 aaPredicted RBP1.69□□□□□ -2.14
LINC00643-201ENST00000334389 OLFM1Q99784 485 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 NACAP1Q9BZK3 213 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 PLA2G2FQ9BZM2 168 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 IMPG2Q9BZV3 1241 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 LSG1Q9H089 658 aaKnown RBP1.69□□□□□ -2.14
LINC00643-201ENST00000334389 TTC12Q9H892 705 aaPredicted RBP1.69□□□□□ -2.14
LINC00643-201ENST00000334389 TUFT1Q9NNX1 390 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 PDE7BQ9NP56 450 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 PIH1D3Q9NQM4 214 aaKnown RBP1.69□□□□□ -2.14
LINC00643-201ENST00000334389 CLIC5Q9NZA1 410 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 SLC9A2Q9UBY0 812 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 RBM19Q9Y4C8 960 aaKnown RBP1.69□□□□□ -2.14
LINC00643-201ENST00000334389 PCDHB9Q9Y5E1 797 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 PCDHB2Q9Y5E7 798 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 ENTPD2Q9Y5L3 495 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 MYCBP2O75592 4640 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 C3orf84H3BNL1 204 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 CILPO75339 1184 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 SLC2A4P14672 509 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 BRAFP15056 766 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 ZSCAN20P17040 1043 aaPredicted RBP1.69□□□□□ -2.14
LINC00643-201ENST00000334389 ALDH4A1P30038 563 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 FOXN2P32314 431 aa1.69□□□□□ -2.14
LINC00643-201ENST00000334389 AP3M2P53677 418 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms