RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CXCL14O95715 111 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 BDNFP23560 247 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 PSMD5Q16401 504 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 DCAF6Q58WW2 860 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 RAPH1Q70E73 1250 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 IQCKQ8N0W5 287 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 CCNYQ8ND76 341 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 AGR3Q8TD06 166 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 TEKT4Q8WW24 435 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 CCDC97Q96F63 343 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-201ENST00000334136 TTC25Q96NG3 672 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 TBC1D13Q9NVG8 400 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 ZBTB42B2RXF5 422 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 TIMP1P01033 207 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 SETSIPP0DME0 302 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 HOXD8P13378 290 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-201ENST00000334136 MAGEA4P43358 317 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 TUFMP49411 452 aaKnown RBP12.22□□□□□ -0.45
HDAC6-201ENST00000334136 LILRA4P59901 499 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 ATG16L1Q676U5 607 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 FAM126BQ8IXS8 530 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 RBM41Q96IZ5 413 aaKnown RBP12.22□□□□□ -0.45
HDAC6-201ENST00000334136 FBXL18Q96ME1 805 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 ZNF518BQ9C0D4 1074 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 ELOVL4Q9GZR5 314 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 IL23AQ9NPF7 189 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 UVRAGQ9P2Y5 699 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 CRCPO75575 148 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 SH3BGRP55822 239 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-201ENST00000334136 HIF1AQ16665 826 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 LVRNQ6Q4G3 990 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 RASSF3Q86WH2 238 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 TOP6BLQ8N6T0 577 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 THTPAQ9BU02 230 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 IGFLR1Q9H665 355 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 METTL5Q9NRN9 209 aaKnown RBP12.22□□□□□ -0.45
HDAC6-201ENST00000334136 AIPL1Q9NZN9 384 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 CDH9Q9ULB4 789 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 ZBED1O96006 694 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 HMBSP08397 361 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 ZCCHC18P0CG32 403 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 SATB1Q01826 763 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 KRT80Q6KB66 452 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 MFSD5Q6N075 450 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 C3orf20Q8ND61 904 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 MRPS31Q92665 395 aaKnown RBP12.22□□□□□ -0.45
HDAC6-201ENST00000334136 SMARCD1Q96GM5 515 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 NAF1Q96HR8 494 aaKnown RBP12.22□□□□□ -0.45
HDAC6-201ENST00000334136 MCEEQ96PE7 176 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 FIZ1Q96SL8 496 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 ROPN1BQ9BZX4 212 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-201ENST00000334136 CERS4Q9HA82 394 aa12.22□□□□□ -0.45
HDAC6-201ENST00000334136 ROPN1Q9HAT0 212 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-201ENST00000334136 PAK6Q9NQU5 681 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-201ENST00000334136 TRPM7Q96QT4 1865 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 ZBTB24O43167 697 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-201ENST00000334136 CREB3O43889 395 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 GPC4O75487 556 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 SHBGP04278 402 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 NCAM1P13591 858 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 RARGP13631 454 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 ALDH18A1P54886 795 aaKnown RBP12.21□□□□□ -0.45
HDAC6-201ENST00000334136 ELF3P78545 371 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-201ENST00000334136 RPS6KA2Q15349 733 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 QPCTQ16769 361 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 AADACL2Q6P093 401 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 FUT10Q6P4F1 479 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 NUDCD3Q8IVD9 361 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 TMEM237Q96Q45 408 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 DMAP1Q9NPF5 467 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-201ENST00000334136 STYXL1Q9Y6J8 313 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 ZNF623O75123 536 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 GZMAP12544 262 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 CCDC130P13994 396 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 OR1D2P34982 312 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 GLUD2P49448 558 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 SULT1E1P49888 294 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 AP2B1P63010 937 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 ITIH4Q14624 930 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 C10orf120Q5SQS8 335 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 SWT1Q5T5J6 900 aaKnown RBP12.21□□□□□ -0.45
HDAC6-201ENST00000334136 TRIML2Q8N7C3 387 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 ATP11CQ8NB49 1132 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 B3GALNT2Q8NCR0 500 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 SHC3Q92529 594 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 LRGUKQ96M69 825 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 TSSK1BQ9BXA7 367 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 OSBPL8Q9BZF1 889 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 RGS18Q9NS28 235 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 TRPM5Q9NZQ8 1165 aa12.21□□□□□ -0.45
HDAC6-201ENST00000334136 APOBEC2Q9Y235 224 aaKnown RBP12.21□□□□□ -0.45
HDAC6-201ENST00000334136 B2RBV5 119 aa12.21□□□□□ -0.46
HDAC6-201ENST00000334136 CCDC22O60826 627 aa12.21□□□□□ -0.46
HDAC6-201ENST00000334136 ADH1AP07327 375 aa12.21□□□□□ -0.46
HDAC6-201ENST00000334136 PBX3P40426 434 aa12.21□□□□□ -0.46
HDAC6-201ENST00000334136 RCN1Q15293 331 aa12.21□□□□□ -0.46
HDAC6-201ENST00000334136 EFHC2Q5JST6 749 aa12.21□□□□□ -0.46
HDAC6-201ENST00000334136 ARHGAP18Q8N392 663 aa12.21□□□□□ -0.46
HDAC6-201ENST00000334136 DNAAF3Q8N9W5 541 aa12.21□□□□□ -0.46
HDAC6-201ENST00000334136 MCUQ8NE86 351 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms