RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 CMPK2Q5EBM0 449 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 FBXO47Q5MNV8 452 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 GJC2Q5T442 439 aaPredicted RBP11.13□□□□□ -0.63
CCDC172-201ENST00000333254 SCYL2Q6P3W7 929 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 MOB2Q70IA6 237 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 CATSPER4Q7RTX7 472 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 TMEM130Q8N3G9 435 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 KIF2BQ8N4N8 673 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 KBTBD7Q8WVZ9 684 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 SIKE1Q9BRV8 207 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 NAT9Q9BTE0 207 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 RAB6CQ9H0N0 254 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 PLAC1Q9HBJ0 212 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 SNTG2Q9NY99 539 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 RNF181Q9P0P0 153 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 SIRPGQ9P1W8 387 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 C15orf41Q9Y2V0 281 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 PLLPQ9Y342 182 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 PCDHA11Q9Y5I1 949 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 RAD54BQ9Y620 910 aa11.13□□□□□ -0.63
CCDC172-201ENST00000333254 A0A0A0MRY4 1105 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 A8MXQ7 604 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 TRIM49D1C9J1S8 452 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 XPO1O14980 1071 aaKnown RBP11.12□□□□□ -0.63
CCDC172-201ENST00000333254 RFPL1O75677 317 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 SMPD1P17405 629 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 SV2CQ496J9 727 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 PLEKHG4Q58EX7 1191 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 ATG16L1Q676U5 607 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 UNC5AQ6ZN44 842 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 MARK2Q7KZI7 788 aaKnown RBP11.12□□□□□ -0.63
CCDC172-201ENST00000333254 SCUBE3Q8IX30 993 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 ENDOVQ8N8Q3 282 aaKnown RBP11.12□□□□□ -0.63
CCDC172-201ENST00000333254 OR6J1Q8NGC5 347 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 FBXO41Q8TF61 875 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 KCTD13Q8WZ19 329 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 NT5C3BQ969T7 300 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 TTC17Q96AE7 1141 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 MRRFQ96E11 262 aaKnown RBP11.12□□□□□ -0.63
CCDC172-201ENST00000333254 MAML3Q96JK9 1138 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 TNIP3Q96KP6 325 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 SPATA13Q96N96 652 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 CSPG4P5Q96PW8 444 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 SRPK1Q96SB4 655 aaKnown RBP11.12□□□□□ -0.63
CCDC172-201ENST00000333254 MYCBPQ99417 103 aaPredicted RBP11.12□□□□□ -0.63
CCDC172-201ENST00000333254 IQCGQ9H095 443 aaKnown RBP11.12□□□□□ -0.63
CCDC172-201ENST00000333254 MMADHCQ9H3L0 296 aaPredicted RBP11.12□□□□□ -0.63
CCDC172-201ENST00000333254 GPATCH2LQ9NWQ4 482 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 KCNK4Q9NYG8 393 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.12□□□□□ -0.63
CCDC172-201ENST00000333254 MOCS1Q9NZB8 636 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 TUBGCP4Q9UGJ1 667 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 HEY1Q9Y5J3 304 aa11.12□□□□□ -0.63
CCDC172-201ENST00000333254 TRIP12Q14669 1992 aaPredicted RBP11.12□□□□□ -0.63
CCDC172-201ENST00000333254 PPEF2O14830 753 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 CCDC22O60826 627 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 OPHN1O60890 802 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 GRAP2O75791 330 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 RECQL4O94761 1208 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 HAUS5O94927 633 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 LMNAP02545 664 aaKnown RBP11.11□□□□□ -0.63
CCDC172-201ENST00000333254 APRTP07741 180 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 DLDP09622 509 aaKnown RBP11.11□□□□□ -0.63
CCDC172-201ENST00000333254 PYGBP11216 843 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 WARSP23381 471 aaKnown RBP11.11□□□□□ -0.63
CCDC172-201ENST00000333254 TARSP26639 723 aaKnown RBP11.11□□□□□ -0.63
CCDC172-201ENST00000333254 EPHX2P34913 555 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 CRHR1P34998 444 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 MATKP42679 507 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 GLUD2P49448 558 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 TAF6P49848 677 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 GTF2A2P52657 109 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 ARFIP2P53365 341 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 NRLP54845 237 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 SLC8A3P57103 927 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 ADAM17P78536 824 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 FRG1Q14331 258 aaKnown RBP11.11□□□□□ -0.63
CCDC172-201ENST00000333254 SLC25A52Q3SY17 297 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 NCBP2-AS2Q69YL0 99 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 HEATR6Q6AI08 1181 aaKnown RBP11.11□□□□□ -0.63
CCDC172-201ENST00000333254 PRPF39Q86UA1 669 aaKnown RBP11.11□□□□□ -0.63
CCDC172-201ENST00000333254 TOP6BLQ8N6T0 577 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 PPM1NQ8N819 430 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 MAB21L3Q8N8X9 362 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 OR6B3Q8NGW1 331 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 GIMAP7Q8NHV1 300 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 PTPRN2Q92932 1015 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 SLC10A4Q96EP9 437 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 CFAP36Q96G28 342 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 FAM111AQ96PZ2 611 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 KCTD15Q96SI1 283 aaPredicted RBP11.11□□□□□ -0.63
CCDC172-201ENST00000333254 SLC9A7Q96T83 725 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 HNRNPABQ99729 332 aaKnown RBP11.11□□□□□ -0.63
CCDC172-201ENST00000333254 FERMT1Q9BQL6 677 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 TINF2Q9BSI4 451 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 TBC1D10AQ9BXI6 508 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 KCNK13Q9HB14 408 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 NPHS2Q9NP85 383 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 FAM49BQ9NUQ9 324 aa11.11□□□□□ -0.63
CCDC172-201ENST00000333254 GEMIN8Q9NWZ8 242 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms