RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 H0YGN5 161 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 PIRO00625 290 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 CYBAP13498 195 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 ATP2A2P16615 1042 aaKnown RBP9.36□□□□□ -0.91
COPB2-201ENST00000333188 GMPRP36959 345 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 PNPLA4P41247 253 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 EIF3BP55884 814 aaKnown RBP9.36□□□□□ -0.91
COPB2-201ENST00000333188 EFEMP1Q12805 493 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 CCDC121Q6ZUS5 278 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 SPNS2Q8IVW8 549 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 VPS52Q8N1B4 723 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 TTC9BQ8N6N2 239 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 LRRC52Q8N7C0 313 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 UBR7Q8N806 425 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 PPP1R14CQ8TAE6 165 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 CPT1BQ92523 772 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 SLC38A7Q9NVC3 462 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 TMLHEQ9NVH6 421 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 CNTN3Q9P232 1028 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 MARCOQ9UEW3 520 aaPredicted RBP9.36□□□□□ -0.91
COPB2-201ENST00000333188 ZC3H7BQ9UGR2 993 aaKnown RBP9.36□□□□□ -0.91
COPB2-201ENST00000333188 ATP11BQ9Y2G3 1177 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 NFS1Q9Y697 457 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 TLL2Q9Y6L7 1015 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 NUP205Q92621 2012 aa9.36□□□□□ -0.91
COPB2-201ENST00000333188 TBKBP1A7MCY6 615 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 APOC4-APOC2K7ER74 178 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 APOC2P02655 101 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 IRF1P10914 325 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 HOXD10P28358 340 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 LRRTM3Q86VH5 581 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 THEM5Q8N1Q8 247 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 TTC13Q8NBP0 860 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 PCSK9Q8NBP7 692 aaKnown RBP9.35□□□□□ -0.91
COPB2-201ENST00000333188 CXorf38Q8TB03 319 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 MYCBPAPQ8TBZ2 947 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 PABPC5Q96DU9 382 aaKnown RBP9.35□□□□□ -0.91
COPB2-201ENST00000333188 KCTD15Q96SI1 283 aaPredicted RBP9.35□□□□□ -0.91
COPB2-201ENST00000333188 SH3GL2Q99962 352 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 DUSP16Q9BY84 665 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 KLC2Q9H0B6 622 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 TRABDQ9H4I3 376 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 NRDE2Q9H7Z3 1164 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 CAPN7Q9Y6W3 813 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 BRCA1P38398 1863 aaKnown RBP9.35□□□□□ -0.91
COPB2-201ENST00000333188 JCHAINP01591 159 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 MRPS5P82675 430 aaKnown RBP9.35□□□□□ -0.91
COPB2-201ENST00000333188 SEPT6Q14141 434 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 EFHC1Q5JVL4 640 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 GKAP1Q5VSY0 366 aaPredicted RBP9.35□□□□□ -0.91
COPB2-201ENST00000333188 BBS12Q6ZW61 710 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 IGDCC3Q8IVU1 814 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 CACNA2D3Q8IZS8 1091 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 BBOF1Q8ND07 529 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 PRDM12Q9H4Q4 367 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.35□□□□□ -0.91
COPB2-201ENST00000333188 SMPD4Q9NXE4 827 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 GRIN2DO15399 1336 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 RGPD3A6NKT7 1758 aaPredicted RBP9.35□□□□□ -0.91
COPB2-201ENST00000333188 RGPD4Q7Z3J3 1758 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 ZBBXA8MT70 800 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 MFSD11O43934 449 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 UGT1A9O60656 530 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 PMPCBO75439 489 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 METTL18O95568 372 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 MT-ND3P03897 115 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 ODC1P11926 461 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 IVDP26440 423 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 TNFRSF8P28908 595 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 PCSK1P29120 753 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 POU5F1BQ06416 359 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 SLC10A2Q12908 348 aaPredicted RBP9.35□□□□□ -0.91
COPB2-201ENST00000333188 KBTBD12Q3ZCT8 623 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 CTXN3Q4LDR2 81 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 PPP1R2P3Q6NXS1 205 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 RNF135Q8IUD6 432 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 PPIL6Q8IXY8 311 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 GSTCDQ8NEC7 633 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 ZNF296Q8WUU4 475 aaPredicted RBP9.35□□□□□ -0.91
COPB2-201ENST00000333188 CSPG4P5Q96PW8 444 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 XPO6Q96QU8 1125 aaKnown RBP9.35□□□□□ -0.91
COPB2-201ENST00000333188 SMOQ99835 787 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 STMN4Q9H169 189 aaPredicted RBP9.35□□□□□ -0.91
COPB2-201ENST00000333188 EPB41L4BQ9H329 900 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 UGT1A7Q9HAW7 530 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 UGT1A10Q9HAW8 530 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 UGT1A8Q9HAW9 530 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 KIAA1257Q9ULG3 409 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 PTCH2Q9Y6C5 1203 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 KIF13BQ9NQT8 1826 aa9.35□□□□□ -0.91
COPB2-201ENST00000333188 A0A087WUV0 522 aaPredicted RBP9.34□□□□□ -0.91
COPB2-201ENST00000333188 FAM155AB1AL88 458 aaPredicted RBP9.34□□□□□ -0.91
COPB2-201ENST00000333188 CYP2C18P33260 490 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 INCA1Q0VD86 236 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 PPP1R15BQ5SWA1 713 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 KDM7AQ6ZMT4 941 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 TRMT10CQ7L0Y3 403 aaKnown RBP9.34□□□□□ -0.91
COPB2-201ENST00000333188 MPP5Q8N3R9 675 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 OR10T2Q8NGX3 314 aa9.34□□□□□ -0.91
COPB2-201ENST00000333188 ERLEC1Q96DZ1 483 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms