RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 TSPAN3O60637 253 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 SRP72O76094 671 aaKnown RBP13.4□□□□□ -0.26
VSTM4-202ENST00000332853 TAS2R40P59535 323 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 USP6NLQ92738 828 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 SENP8Q96LD8 212 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 ADAM2Q99965 735 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 TMEM120AQ9BXJ8 343 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 SHOC2Q9UQ13 582 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 V9GYQ6 96 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 STX7O15400 261 aaKnown RBP13.4□□□□□ -0.26
VSTM4-202ENST00000332853 KPNA6O60684 536 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 HNRNPCL1O60812 293 aaKnown RBP13.4□□□□□ -0.26
VSTM4-202ENST00000332853 SUPT7LO94864 414 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 SERPIND1P05546 499 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 AQP5P55064 265 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 ITIH4Q14624 930 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 UNC45BQ8IWX7 931 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 CLEC4DQ8WXI8 215 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 CMTM5Q96DZ9 223 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 MFSD14AQ96MC6 490 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 SIGLEC16A6NMB1 481 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 USP2O75604 605 aaPredicted RBP13.4□□□□□ -0.26
VSTM4-202ENST00000332853 HNRNPH3P31942 346 aaKnown RBP13.4□□□□□ -0.26
VSTM4-202ENST00000332853 LAMB3Q13751 1172 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 DPYSL3Q14195 570 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 PLPPR4Q7Z2D5 763 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 TCP10LQ8TDR4 215 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 MTBPQ96DY7 904 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 TKTL2Q9H0I9 626 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 SLC24A2Q9UI40 661 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 ATP11BQ9Y2G3 1177 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 RNF103O00237 685 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 CBX4O00257 560 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 CHKAP35790 457 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 ARHGDIAP52565 204 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 MARSP56192 900 aaKnown RBP13.4□□□□□ -0.26
VSTM4-202ENST00000332853 RARS2Q5T160 578 aaKnown RBP13.4□□□□□ -0.26
VSTM4-202ENST00000332853 MAP2K7O14733 419 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 MYO1DO94832 1006 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 AXLP30530 894 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 CCR1P32246 355 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 TUBP50607 506 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 AMPD2Q01433 879 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 ZACNQ401N2 412 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 ZNF280DQ6N043 979 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 WNK4Q96J92 1243 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 UBOX5O94941 541 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 PYGLP06737 847 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 OXCT1P55809 520 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 CRADDP78560 199 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 PLIN5Q00G26 463 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 PRELID2Q8N945 189 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 CRLS1Q9UJA2 301 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 CLDN5O00501 218 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 TMCC1O94876 653 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 YBX3P16989 372 aaKnown RBP eCLIP13.39□□□□□ -0.27
VSTM4-202ENST00000332853 HNRNPH1P31943 449 aaKnown RBP13.39□□□□□ -0.27
VSTM4-202ENST00000332853 NUDT2P50583 147 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 NOMO3P69849 1222 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 BFSP2Q13515 415 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 HGSNATQ68CP4 663 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 ZDHHC17Q8IUH5 632 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 GALNT4Q8N4A0 578 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 HES6Q96HZ4 224 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 CCDC90BQ9GZT6 254 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 ILKAPQ9H0C8 392 aaPredicted RBP13.39□□□□□ -0.27
VSTM4-202ENST00000332853 KIF17Q9P2E2 1029 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 DUOX1Q9NRD9 1551 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 SPEF2Q9C093 1822 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 STMN1P16949 149 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 BTKQ06187 659 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 CSHL1Q14406 222 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 CYTH1Q15438 398 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 ZC3H12AQ5D1E8 599 aaKnown RBP13.39□□□□□ -0.27
VSTM4-202ENST00000332853 TAF2Q6P1X5 1199 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 POTEAQ6S8J7 498 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 C16orf89Q6UX73 402 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 SOCS4Q8WXH5 440 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 SEPT8Q92599 483 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 PCDHB8Q9UN66 801 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 PTPN1P18031 435 aaKnown RBP13.39□□□□□ -0.27
VSTM4-202ENST00000332853 RRP1BQ14684 758 aaKnown RBP13.39□□□□□ -0.27
VSTM4-202ENST00000332853 ARRDC4Q8NCT1 418 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 TSC22D3Q99576 134 aa13.39□□□□□ -0.27
VSTM4-202ENST00000332853 C2orf81A6NN90 581 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 BTNL10A8MVZ5 291 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 DCDC2CA8MYV0 355 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 AKAP10O43572 662 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 CKMP06732 381 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 FAAP100Q0VG06 881 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 INPP4AQ96PE3 977 aaPredicted RBP13.38□□□□□ -0.27
VSTM4-202ENST00000332853 RNF112Q9ULX5 631 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 IL10P22301 178 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 KCNA4P22459 653 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 MPP3Q13368 585 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 TEDDM1Q5T9Z0 273 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 CYB5D1Q6P9G0 228 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 SALL4Q9UJQ4 1053 aa13.38□□□□□ -0.27
VSTM4-202ENST00000332853 ABCC6O95255 1503 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms