RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 PMF1Q6P1K2 205 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 TTC27Q6P3X3 843 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 SPATA24Q86W54 205 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 IQCKQ8N0W5 287 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 ATP6V0D2Q8N8Y2 350 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 PPP1R36Q96LQ0 422 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 TKTL2Q9H0I9 626 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 MUC3BQ9H195 1237 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 NEUROG2Q9H2A3 272 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 KANSL3Q9P2N6 904 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 SLC39A10Q9ULF5 831 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.83□□□□□ -0.84
SS18L1-201ENST00000331758 LUC7L3O95232 432 aaKnown RBP9.83□□□□□ -0.84
SS18L1-201ENST00000331758 SLC2A3P11169 496 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 STX1BP61266 288 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 STX3Q13277 289 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 TAF5Q15542 800 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 B3GNT9Q6UX72 402 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 SUGP1Q8IWZ8 645 aaKnown RBP9.83□□□□□ -0.84
SS18L1-201ENST00000331758 STKLD1Q8NE28 680 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 HIPK4Q8NE63 616 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 LMO3Q8TAP4 145 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 ABCF3Q9NUQ8 709 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 HMGXB4Q9UGU5 601 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 PADI3Q9ULW8 664 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 RNF103O00237 685 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 SH3BP5O60239 455 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 PPFIA2O75334 1257 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 BANF1O75531 89 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 S100BP04271 92 aaPredicted RBP9.83□□□□□ -0.84
SS18L1-201ENST00000331758 ITGA7Q13683 1181 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 KCNA10Q16322 511 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 CES3Q6UWW8 571 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 POLNQ7Z5Q5 900 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 XYLT1Q86Y38 959 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 ERP27Q96DN0 273 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 ECT2Q9H8V3 914 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 PIDD1Q9HB75 910 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 PCDHB5Q9Y5E4 795 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 C4AP0C0L4 1744 aa9.83□□□□□ -0.84
SS18L1-201ENST00000331758 SRRM3A6NNA2 597 aaPredicted RBP9.82□□□□□ -0.84
SS18L1-201ENST00000331758 CLGNO14967 610 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 SNAI1O95863 264 aaPredicted RBP9.82□□□□□ -0.84
SS18L1-201ENST00000331758 TPH1P17752 444 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 CCL23P55773 120 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 TARBP2Q15633 366 aaKnown RBP9.82□□□□□ -0.84
SS18L1-201ENST00000331758 ANKRD20A8PQ5CZ79 823 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 CRELD2Q6UXH1 353 aaPredicted RBP9.82□□□□□ -0.84
SS18L1-201ENST00000331758 TAS2R42Q7RTR8 314 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 TRPM8Q7Z2W7 1104 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 PACS2Q86VP3 889 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 MREGQ8N565 214 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 ZCCHC9Q8N567 271 aaKnown RBP9.82□□□□□ -0.84
SS18L1-201ENST00000331758 N4BP2L2Q92802 583 aaPredicted RBP9.82□□□□□ -0.84
SS18L1-201ENST00000331758 TMEM106CQ9BVX2 250 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 ADAMTS5Q9UNA0 930 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 ERFP50548 548 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 TWF1Q12792 350 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 PKN2Q16513 984 aaKnown RBP9.82□□□□□ -0.84
SS18L1-201ENST00000331758 ZNF792Q3KQV3 632 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 SDHAF4Q5VUM1 108 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 UNC45BQ8IWX7 931 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 ARHGAP18Q8N392 663 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 ASIC4Q96FT7 647 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 TWNKQ96RR1 684 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 SENP6Q9GZR1 1112 aaPredicted RBP9.82□□□□□ -0.84
SS18L1-201ENST00000331758 TASP1Q9H6P5 420 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 SLC24A3Q9HC58 644 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 RBM22Q9NW64 420 aaKnown RBP eCLIP9.82□□□□□ -0.846e-7■■□□□ 12.4
SS18L1-201ENST00000331758 TMEM88BA6NKF7 163 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 PSMD3O43242 534 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 ZNF189O75820 626 aaPredicted RBP9.82□□□□□ -0.84
SS18L1-201ENST00000331758 GOT1P17174 413 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 OCRLQ01968 901 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 OLFML2BQ68BL8 750 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.82□□□□□ -0.844e-6■■■■□ 26.3
SS18L1-201ENST00000331758 SLC26A11Q86WA9 606 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 ALLCQ8N6M5 410 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 LPIN3Q9BQK8 851 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 TUBB6Q9BUF5 446 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 ATXN3LQ9H3M9 355 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 DPEP3Q9H4B8 488 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 ARHGEF38Q9NXL2 777 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 CACNG4Q9UBN1 327 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 USH1CQ9Y6N9 552 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 COL4A1P02462 1669 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 A0A1B0GUL6 1792 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 AP3B1O00203 1094 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 HOXA2O43364 376 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 ANXA9O76027 345 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 ENDOD1O94919 500 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 ZWINTO95229 277 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 RPL10AP62906 217 aaKnown RBP9.82□□□□□ -0.84
SS18L1-201ENST00000331758 UGP2Q16851 508 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 SGF29Q96ES7 293 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 PGM2Q96G03 612 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 RNF39Q9H2S5 420 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 NRDE2Q9H7Z3 1164 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 MANSC1Q9H8J5 431 aa9.82□□□□□ -0.84
SS18L1-201ENST00000331758 OR12D3Q9UGF7 316 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms