RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 TBCBQ99426 244 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 MMP19Q99542 508 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 FDXACB1Q9BRP7 624 aaPredicted RBP15.91■□□□□ 0.14
BRCC3-201ENST00000330045 RNPEPQ9H4A4 650 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 PDGFCQ9NRA1 345 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 MKS1Q9NXB0 559 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 SIRPGQ9P1W8 387 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 ZFATQ9P243 1243 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 ITGA11Q9UKX5 1188 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 MAD1L1Q9Y6D9 718 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 EVPLQ92817 2033 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 A6NHS1 94 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 KRT36O76013 467 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 CELF2O95319 508 aaKnown RBP15.91■□□□□ 0.14
BRCC3-201ENST00000330045 CSH1P0DML2 217 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 CSH2P0DML3 217 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 POU5F1BQ06416 359 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 CHI3L2Q15782 390 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 PPP6R3Q5H9R7 873 aaPredicted RBP15.91■□□□□ 0.14
BRCC3-201ENST00000330045 GJC2Q5T442 439 aaPredicted RBP15.91■□□□□ 0.14
BRCC3-201ENST00000330045 C4orf22Q6V702 233 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 ARID3BQ8IVW6 561 aaPredicted RBP15.91■□□□□ 0.14
BRCC3-201ENST00000330045 ARHGAP24Q8N264 748 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 ACAP3Q96P50 834 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 ZNF670Q9BS34 389 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 NMRK2Q9NPI5 230 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 DPP3Q9NY33 737 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 KAT6AQ92794 2004 aa15.91■□□□□ 0.14
BRCC3-201ENST00000330045 CCL15-CCL14A0A0B4J2E2 113 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 CYB561D2O14569 222 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 NVLO15381 856 aaKnown RBP15.9■□□□□ 0.14
BRCC3-201ENST00000330045 PSMG1O95456 288 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 TXNP10599 105 aaKnown RBP15.9■□□□□ 0.14
BRCC3-201ENST00000330045 DESP17661 470 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 SLC6A3Q01959 620 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 OCRLQ01968 901 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 STILQ15468 1287 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 CCL15Q16663 113 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 PPP1R26Q5T8A7 1209 aaPredicted RBP15.9■□□□□ 0.14
BRCC3-201ENST00000330045 SNX30Q5VWJ9 437 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 CDKL3Q8IVW4 592 aaPredicted RBP15.9■□□□□ 0.14
BRCC3-201ENST00000330045 GSDMBQ8TAX9 411 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 WDR60Q8WVS4 1066 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 ZNF333Q96JL9 665 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 SIGLEC10Q96LC7 697 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 ARHGEF4Q9NR80 690 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 NMRK1Q9NWW6 199 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 ZSWIM8A7E2V4 1837 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 CCDC195A0A1B0GUA6 201 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 MDM4O15151 490 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 METTL18O95568 372 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 ARF4P18085 180 aaPredicted RBP15.9■□□□□ 0.14
BRCC3-201ENST00000330045 PGM1P36871 562 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 MAGEA3P43357 314 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 HSF5Q4G112 596 aaPredicted RBP15.9■□□□□ 0.14
BRCC3-201ENST00000330045 MROH9Q5TGP6 573 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 CES4AQ5XG92 561 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 TRMT10BQ6PF06 316 aaKnown RBP15.9■□□□□ 0.14
BRCC3-201ENST00000330045 SCUBE3Q8IX30 993 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 NDUFAF2Q8N183 169 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 SMC1BQ8NDV3 1235 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 KHSRPQ92945 711 aaKnown RBP eCLIP15.9■□□□□ 0.142e-6■■□□□ 14.2
BRCC3-201ENST00000330045 STMN2Q93045 179 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 EBNA1BP2Q99848 306 aaKnown RBP15.9■□□□□ 0.14
BRCC3-201ENST00000330045 PTPN18Q99952 460 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 TRIM56Q9BRZ2 755 aaKnown RBP15.9■□□□□ 0.14
BRCC3-201ENST00000330045 WWP1Q9H0M0 922 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 FAM124BQ9H5Z6 455 aaPredicted RBP15.9■□□□□ 0.14
BRCC3-201ENST00000330045 NRDE2Q9H7Z3 1164 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 PCMTD2Q9NV79 361 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 ERAP1Q9NZ08 941 aa15.9■□□□□ 0.14
BRCC3-201ENST00000330045 DNAJC25-GNG10A0A024R161 153 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 FAM159BA6NKW6 160 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 CAPN14A8MX76 684 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 B2RBV5 119 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 CAPN9O14815 690 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 STAU1O95793 577 aaKnown RBP15.89■□□□□ 0.13
BRCC3-201ENST00000330045 SLC25A27O95847 323 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 PDHA1P08559 390 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 CYP2F1P24903 491 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 CPA2P48052 419 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 SLC34A1Q06495 639 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 KCTD2Q14681 263 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 KYAT1Q16773 422 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 TEX44Q53QW1 395 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 ZNF534Q76KX8 674 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 TMPRSS6Q8IU80 811 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 CRLF3Q8IUI8 442 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 MPP5Q8N3R9 675 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 PDCD7Q8N8D1 485 aaKnown RBP15.89■□□□□ 0.13
BRCC3-201ENST00000330045 ZNF395Q9H8N7 513 aaPredicted RBP15.89■□□□□ 0.13
BRCC3-201ENST00000330045 PPARGC1AQ9UBK2 798 aaKnown RBP15.89■□□□□ 0.13
BRCC3-201ENST00000330045 C2CD2Q9Y426 696 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 ENO1P06733 434 aaKnown RBP15.89■□□□□ 0.13
BRCC3-201ENST00000330045 KITP10721 976 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 INSRRP14616 1297 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 CRHR1P34998 444 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 HDAC4P56524 1084 aa15.89■□□□□ 0.13
BRCC3-201ENST00000330045 MRPS35P82673 323 aaKnown RBP15.89■□□□□ 0.13
BRCC3-201ENST00000330045 TMEM110Q86TL2 294 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms