RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 C1orf53Q5VUE5 145 aa21.07■□□□□ 0.96
RIPPLY3-201ENST00000329553 PM20D1Q6GTS8 502 aa21.07■□□□□ 0.96
RIPPLY3-201ENST00000329553 VSIG1Q86XK7 387 aa21.07■□□□□ 0.96
RIPPLY3-201ENST00000329553 MARCH5Q9NX47 278 aa21.07■□□□□ 0.96
RIPPLY3-201ENST00000329553 BCCIPQ9P287 314 aaKnown RBP eCLIP21.07■□□□□ 0.96
RIPPLY3-201ENST00000329553 TBKBP1A7MCY6 615 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 SGK1O00141 431 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 SYN3O14994 580 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 HOXA2O43364 376 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 NUDT17P0C025 328 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 KRT71Q3SY84 523 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 C4orf50Q6ZRC1 276 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 CEP57Q86XR8 500 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 PLD5Q8N7P1 536 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 TLCD1Q96CP7 247 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 FAF2Q96CS3 445 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 ZNF670Q9BS34 389 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 COLEC11Q9BWP8 271 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 LRRC4CQ9HCJ2 640 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 ANAPC5Q9UJX4 755 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 ATP11BQ9Y2G3 1177 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 VWA8A3KMH1 1905 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 NCAM1P13591 858 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 PMS2P54278 862 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 EIF3EP60228 445 aaKnown RBP21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 NME3Q13232 169 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 C1orf228Q6PIY5 440 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 PYROXD2Q8N2H3 581 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 SCAMP5Q8TAC9 235 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 P3H4Q92791 437 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 KCTD15Q96SI1 283 aaPredicted RBP21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 PNPLA8Q9NP80 782 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 PPANQ9NQ55 473 aaKnown RBP21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 PIGVQ9NUD9 493 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 TBX21Q9UL17 535 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 FZD10Q9ULW2 581 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 USP3Q9Y6I4 520 aa21.06■□□□□ 0.96
RIPPLY3-201ENST00000329553 GMNCA6NCL1 334 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 NT5C1B-RDH14C9J2C7 533 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 KIAA0754O94854 1291 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 IFNB1P01574 187 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 RBP3P10745 1247 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 RDXP35241 583 aaKnown RBP21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 GRIK1P39086 918 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 PBX3P40426 434 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 GDF10P55107 478 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 MAGOHP61326 146 aaKnown RBP21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 DEUP1Q05D60 604 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 NOMO1Q15155 1222 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 P3H1Q32P28 736 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 IZUMO3Q5VZ72 239 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 SLC9A4Q6AI14 798 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 SLC7A14Q8TBB6 771 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 ADAM32Q8TC27 787 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 B3GALT6Q96L58 329 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 AAASQ9NRG9 546 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 TMPRSS4Q9NRS4 437 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 GALTP07902 379 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 MRPL58Q14197 206 aaKnown RBP21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 DCP1BQ8IZD4 617 aaKnown RBP21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 OTUD6BQ8N6M0 293 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 CCHCR1Q8TD31 782 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 EDEM1Q92611 657 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 VWCEQ96DN2 955 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 ADAM7Q9H2U9 754 aa21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 PABPC3Q9H361 631 aaKnown RBP21.05■□□□□ 0.96
RIPPLY3-201ENST00000329553 ZNF487B1APH4 448 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 APOL1O14791 398 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 MCF2LO15068 1137 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 CHKAP35790 457 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 C6orf89Q6UWU4 347 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 UNC45BQ8IWX7 931 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 BBOF1Q8ND07 529 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 IRGQQ8WZA9 623 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 SEMA4AQ9H3S1 761 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 ABI2Q9NYB9 513 aaPredicted RBP21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 FNDC1Q4ZHG4 1894 aaPredicted RBP21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 TNFRSF10BO14763 440 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 UPP2O95045 317 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 CAV1Q03135 178 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 IFFO1Q0D2I5 559 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 GPS1Q13098 491 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 CTXN3Q4LDR2 81 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 BSPRYQ5W0U4 402 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 FBXO46Q6PJ61 603 aaPredicted RBP21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 ZC3H18Q86VM9 953 aaKnown RBP21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 CCDC25Q86WR0 208 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 SCML4Q8N228 414 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 MRPL9Q9BYD2 267 aaKnown RBP21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 PCDH9Q9HC56 1237 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 TMEM39AQ9NV64 488 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 HEY1Q9Y5J3 304 aa21.04■□□□□ 0.96
RIPPLY3-201ENST00000329553 FSBPO95073 299 aa21.03■□□□□ 0.96
RIPPLY3-201ENST00000329553 RARGP13631 454 aa21.03■□□□□ 0.96
RIPPLY3-201ENST00000329553 FGFR3P22607 806 aa21.03■□□□□ 0.96
RIPPLY3-201ENST00000329553 HIBCHQ6NVY1 386 aaPredicted RBP21.03■□□□□ 0.96
RIPPLY3-201ENST00000329553 FUT10Q6P4F1 479 aa21.03■□□□□ 0.96
RIPPLY3-201ENST00000329553 HOOK3Q86VS8 718 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms