RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 KRT82Q9NSB4 513 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 A0A087WZ62 844 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 LIN7AO14910 233 aaPredicted RBP17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 HNRNPCL1O60812 293 aaKnown RBP17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 SORBS2O94875 1100 aaKnown RBP17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 PPP1R26Q5T8A7 1209 aaPredicted RBP17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 CASC4Q6P4E1 433 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 ACOT1Q86TX2 421 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.99■□□□□ 0.476e-6■■□□□ 12.4
PTP4A3-201ENST00000329397 SPDYE1Q8NFV5 336 aaPredicted RBP17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 FDXACB1Q9BRP7 624 aaPredicted RBP17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 KLC2Q9H0B6 622 aa17.99■□□□□ 0.47
PTP4A3-201ENST00000329397 ITM2AO43736 263 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 VTNP04004 478 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 GABRB2P47870 512 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 RPL10AP62906 217 aaKnown RBP17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 OCRLQ01968 901 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 TEX44Q53QW1 395 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 SMC1BQ8NDV3 1235 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 CHST13Q8NET6 341 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 CFAP61Q8NHU2 1237 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 ZNF483Q8TF39 744 aaPredicted RBP17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 PANX3Q96QZ0 392 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 TSPAN18Q96SJ8 248 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 PDGFCQ9NRA1 345 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 ETAA1Q9NY74 926 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 CAPN14A8MX76 684 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 PPEF2O14830 753 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 BAG2O95816 211 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 LMNAP02545 664 aaKnown RBP17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 UBTFL6P0CB48 400 aaPredicted RBP17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 SP100P23497 879 aaPredicted RBP17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 RXRBP28702 533 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 SLC10A6Q3KNW5 377 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 LBX2Q6XYB7 198 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 RIPOR1Q6ZS17 1223 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 ADGRF2Q8IZF7 708 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 PPP1R13LQ8WUF5 828 aa17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 DHX35Q9H5Z1 703 aaKnown RBP17.98■□□□□ 0.47
PTP4A3-201ENST00000329397 PEX6Q13608 980 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 KRT72Q14CN4 511 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 LRRC36Q1X8D7 754 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 ATG14Q6ZNE5 492 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 GADL1Q6ZQY3 521 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 DENND5BQ6ZUT9 1274 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 EFCAB3Q8N7B9 438 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 DEPDC1BQ8WUY9 529 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 USP6NLQ92738 828 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 IFT122Q9HBG6 1241 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 ZNF638Q14966 1978 aaKnown RBP17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 IGKV6-21A0A0C4DH24 114 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 GABBR2O75899 941 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 MRPS35P82673 323 aaKnown RBP17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 FAM47CQ5HY64 1035 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 TTC30AQ86WT1 665 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 CAMKK2Q96RR4 588 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 SPATC1LQ9H0A9 340 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 SLC7A8Q9UHI5 535 aa17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 HBS1LQ9Y450 684 aaKnown RBP17.97■□□□□ 0.47
PTP4A3-201ENST00000329397 VDRP11473 427 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 EDNRBP24530 442 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 PRKCHP24723 683 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 CYP2F1P24903 491 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 HDAC4P56524 1084 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 SLC25A3Q00325 362 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 CES3Q6UWW8 571 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 RSPH3Q86UC2 560 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 PYROXD2Q8N2H3 581 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 PPP1R14CQ8TAE6 165 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 SH3TC2Q8TF17 1288 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 SIGLEC10Q96LC7 697 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 ZNF778Q96MU6 729 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 ANKRD27Q96NW4 1050 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 C2orf40Q9H1Z8 148 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 KCNK4Q9NYG8 393 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 SIRPGQ9P1W8 387 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 NME7Q9Y5B8 376 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 WDR27A2RRH5 827 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 SMAPO00193 183 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 TSHRP16473 764 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 PHKA2P46019 1235 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 OLIG2Q13516 323 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 DALRD3Q5D0E6 543 aaKnown RBP17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 ILDR2Q71H61 639 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 CRLF3Q8IUI8 442 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 ULK2Q8IYT8 1036 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 STKLD1Q8NE28 680 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 FAM167AQ96KS9 214 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 STX18Q9P2W9 335 aaKnown RBP17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 GINS2Q9Y248 185 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 TNFSF13BQ9Y275 285 aa17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 TNS1Q9HBL0 1735 aaKnown RBP17.96■□□□□ 0.47
PTP4A3-201ENST00000329397 SMIM24O75264 130 aa17.96■□□□□ 0.46
PTP4A3-201ENST00000329397 SPAG6O75602 509 aa17.96■□□□□ 0.46
PTP4A3-201ENST00000329397 ZBTB7AO95365 584 aa17.96■□□□□ 0.46
PTP4A3-201ENST00000329397 C6orf222P0C671 652 aaPredicted RBP17.96■□□□□ 0.46
PTP4A3-201ENST00000329397 SDC4P31431 198 aa17.96■□□□□ 0.46
PTP4A3-201ENST00000329397 VGLL4Q14135 290 aa17.96■□□□□ 0.46
PTP4A3-201ENST00000329397 SCUBE1Q8IWY4 988 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms