RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 USP3Q9Y6I4 520 aa15.51■□□□□ 0.07
TPM3-205ENST00000328159 TET1Q8NFU7 2136 aa15.5■□□□□ 0.07
TPM3-205ENST00000328159 ZNF638Q14966 1978 aaKnown RBP15.5■□□□□ 0.07
TPM3-205ENST00000328159 SMIM23A6NLE4 172 aa15.5■□□□□ 0.07
TPM3-205ENST00000328159 RASGRF2O14827 1237 aa15.5■□□□□ 0.07
TPM3-205ENST00000328159 TRAPPC3O43617 180 aa15.5■□□□□ 0.07
TPM3-205ENST00000328159 SHOX2O60902 331 aaPredicted RBP15.5■□□□□ 0.07
TPM3-205ENST00000328159 NCAM1P13591 858 aa15.5■□□□□ 0.07
TPM3-205ENST00000328159 GOT1P17174 413 aa15.5■□□□□ 0.07
TPM3-205ENST00000328159 AMPD1P23109 780 aa15.5■□□□□ 0.07
TPM3-205ENST00000328159 HPDP32754 393 aaPredicted RBP15.5■□□□□ 0.07
TPM3-205ENST00000328159 EFHC2Q5JST6 749 aa15.5■□□□□ 0.07
TPM3-205ENST00000328159 FAM43BQ6ZT52 329 aaPredicted RBP15.5■□□□□ 0.07
TPM3-205ENST00000328159 CDKL3Q8IVW4 592 aaPredicted RBP15.5■□□□□ 0.07
TPM3-205ENST00000328159 ARFGAP2Q8N6H7 521 aa15.5■□□□□ 0.07
TPM3-205ENST00000328159 NAT8LQ8N9F0 302 aa15.5■□□□□ 0.07
TPM3-205ENST00000328159 EPS8L3Q8TE67 593 aaKnown RBP15.5■□□□□ 0.07
TPM3-205ENST00000328159 RTP4Q96DX8 246 aa15.5■□□□□ 0.07
TPM3-205ENST00000328159 C9orf72Q96LT7 481 aa15.5■□□□□ 0.07
TPM3-205ENST00000328159 SLC9A7Q96T83 725 aa15.5■□□□□ 0.07
TPM3-205ENST00000328159 PRDM16Q9HAZ2 1276 aa15.5■□□□□ 0.07
TPM3-205ENST00000328159 TMPRSS4Q9NRS4 437 aa15.5■□□□□ 0.07
TPM3-205ENST00000328159 COL4A4P53420 1690 aaPredicted RBP15.5■□□□□ 0.07
TPM3-205ENST00000328159 SCN5AQ14524 2016 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.49■□□□□ 0.07
TPM3-205ENST00000328159 DCDC2CA8MYV0 355 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 H3BRJ5 948 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 SMAPO00193 183 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 RGS16O15492 202 aaPredicted RBP15.49■□□□□ 0.07
TPM3-205ENST00000328159 KCNN4O15554 427 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 PQBP1O60828 265 aaKnown RBP15.49■□□□□ 0.07
TPM3-205ENST00000328159 TADA2AO75478 443 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 OAZ2O95190 189 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 CCL5P13501 91 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 NR2C2P49116 596 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 NRLP54845 237 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 MAGOHP61326 146 aaKnown RBP15.49■□□□□ 0.07
TPM3-205ENST00000328159 GBE1Q04446 702 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 XRCC4Q13426 336 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 ANKRD22Q5VYY1 191 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 NCBP2-AS2Q69YL0 99 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 TAB3Q8N5C8 712 aaPredicted RBP15.49■□□□□ 0.07
TPM3-205ENST00000328159 ADAM32Q8TC27 787 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 APBB2Q92870 758 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 NTAN1Q96AB6 310 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 PGAP3Q96FM1 320 aaPredicted RBP15.49■□□□□ 0.07
TPM3-205ENST00000328159 ZCWPW1Q9H0M4 648 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 WDR6Q9NNW5 1121 aaKnown RBP15.49■□□□□ 0.07
TPM3-205ENST00000328159 LRFN2Q9ULH4 789 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 TANC1Q9C0D5 1861 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 A6NNZ2 444 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 ALOX15BO15296 676 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 MAP3K6O95382 1288 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 ABHD2P08910 425 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 OR4Q2P0C623 313 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 RBL1P28749 1068 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 SLCO1A2P46721 670 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 AIF1P55008 147 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 SLC10A2Q12908 348 aaPredicted RBP15.49■□□□□ 0.07
TPM3-205ENST00000328159 AUHQ13825 339 aaKnown RBP15.49■□□□□ 0.07
TPM3-205ENST00000328159 TCTN1Q2MV58 587 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 TUBB8Q3ZCM7 444 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 CENPUQ71F23 418 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 DCP1BQ8IZD4 617 aaKnown RBP15.49■□□□□ 0.07
TPM3-205ENST00000328159 RNF139Q8WU17 664 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 EDEM1Q92611 657 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 TTC25Q96NG3 672 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 CASD1Q96PB1 797 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 RNF208Q9H0X6 261 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 ARHGEF4Q9NR80 690 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 PAK5Q9P286 719 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 VWA8A3KMH1 1905 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 TTC3P53804 2025 aa15.49■□□□□ 0.07
TPM3-205ENST00000328159 GOLGA8MH3BSY2 632 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 SYN3O14994 580 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 F9P00740 461 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 AGTP01019 485 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 ADRA1BP35368 520 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 ACTN2P35609 894 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 GATMP50440 423 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 IRAK1P51617 712 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 ARL4CP56559 192 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 PPP2R2AP63151 447 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 GNGT1P63211 74 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 BASP1P80723 227 aaKnown RBP15.48■□□□□ 0.07
TPM3-205ENST00000328159 SCAPQ12770 1279 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 PDIA2Q13087 525 aaKnown RBP15.48■□□□□ 0.07
TPM3-205ENST00000328159 HIF1AQ16665 826 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 SLC39A12Q504Y0 691 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 SLC45A4Q5BKX6 768 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 BSPRYQ5W0U4 402 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 MFSD5Q6N075 450 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 QKIQ96PU8 341 aaKnown RBP eCLIP15.48■□□□□ 0.078e-8■■■■■ 32.5
TPM3-205ENST00000328159 PHACTR1Q9C0D0 580 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 STMN4Q9H169 189 aaPredicted RBP15.48■□□□□ 0.07
TPM3-205ENST00000328159 ETNK2Q9NVF9 386 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 DDIT4Q9NX09 232 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 FBXW11Q9UKB1 542 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 MFHAS1Q9Y4C4 1052 aa15.48■□□□□ 0.07
TPM3-205ENST00000328159 TCRBV7S3A2A0A539 114 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms