RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 SORT1Q99523 831 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 OXCT2Q9BYC2 517 aaPredicted RBP13.21□□□□□ -0.29
CCDC60-201ENST00000327554 EHMT1Q9H9B1 1298 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 IFT122Q9HBG6 1241 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 ZC3H7BQ9UGR2 993 aaKnown RBP13.21□□□□□ -0.29
CCDC60-201ENST00000327554 EMCNQ9ULC0 261 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 ARHGAP26Q9UNA1 814 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 WDR81Q562E7 1941 aa13.21□□□□□ -0.3
CCDC60-201ENST00000327554 TRDMT1O14717 391 aaKnown RBP13.2□□□□□ -0.3
CCDC60-201ENST00000327554 CHADO15335 359 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 ZNF23P17027 643 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 ARRB2P32121 409 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 GSTM4Q03013 218 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 ACAP1Q15027 740 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 PDK1Q15118 436 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 MROH9Q5TGP6 573 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 PACS1Q6VY07 963 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 TRMT1LQ7Z2T5 733 aaKnown RBP13.2□□□□□ -0.3
CCDC60-201ENST00000327554 PLGRKTQ9HBL7 147 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 KCNH7Q9NS40 1196 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 STK39Q9UEW8 545 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 FAF1Q9UNN5 650 aaPredicted RBP13.2□□□□□ -0.3
CCDC60-201ENST00000327554 APOC4-APOC2K7ER74 178 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 LRCH4O75427 683 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 APOC2P02655 101 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 OATP04181 439 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 PRDX6P30041 224 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 GABRB2P47870 512 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 CACNB3P54284 484 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 MRPS22P82650 360 aaKnown RBP13.2□□□□□ -0.3
CCDC60-201ENST00000327554 TCP10Q12799 353 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 C16orf46Q6P387 395 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 SH3BP5LQ7L8J4 393 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 THNSL1Q8IYQ7 743 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 RTKNQ9BST9 563 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 INO80BQ9C086 356 aaPredicted RBP13.2□□□□□ -0.3
CCDC60-201ENST00000327554 PFDN4Q9NQP4 134 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 KMT5AQ9NQR1 393 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 ARHGAP28Q9P2N2 729 aa13.2□□□□□ -0.3
CCDC60-201ENST00000327554 HERC5Q9UII4 1024 aaKnown RBP13.2□□□□□ -0.3
CCDC60-201ENST00000327554 MCF2LO15068 1137 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 GNPATO15228 680 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 ZBTB14O43829 449 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 TRPA1O75762 1119 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 APOEP02649 317 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 PDGFRBP09619 1106 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 TNNI1P19237 187 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 NCF2P19878 526 aaPredicted RBP13.19□□□□□ -0.3
CCDC60-201ENST00000327554 GARTP22102 1010 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 ENTPD1P49961 510 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 ZNF132P52740 706 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 OXCT1P55809 520 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 PFKPQ01813 784 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 DMP1Q13316 513 aaPredicted RBP13.19□□□□□ -0.3
CCDC60-201ENST00000327554 PSMD6Q15008 389 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 ELMSAN1Q6PJG2 1045 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 CAND1Q86VP6 1230 aaKnown RBP13.19□□□□□ -0.3
CCDC60-201ENST00000327554 LZTR1Q8N653 840 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 KBTBD7Q8WVZ9 684 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 FAF2Q96CS3 445 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 COPS7BQ9H9Q2 264 aaPredicted RBP13.19□□□□□ -0.3
CCDC60-201ENST00000327554 SLC9A2Q9UBY0 812 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 NUB1Q9Y5A7 615 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 HNRNPDLO14979 420 aaKnown RBP13.19□□□□□ -0.3
CCDC60-201ENST00000327554 DCXO43602 365 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 CD1EP15812 388 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 MLH1P40692 756 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 CD151P48509 253 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 HSPA13P48723 471 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 TAP1Q03518 808 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 ABCB5Q2M3G0 1257 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 CYP4A22Q5TCH4 519 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 TRMT10BQ6PF06 316 aaKnown RBP13.19□□□□□ -0.3
CCDC60-201ENST00000327554 RFX6Q8HWS3 928 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 CHERPQ8IWX8 916 aaKnown RBP13.19□□□□□ -0.3
CCDC60-201ENST00000327554 KIAA0319LQ8IZA0 1049 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 GALNT4Q8N4A0 578 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 TSPAN14Q8NG11 270 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 ZNF512Q96ME7 567 aaPredicted RBP13.19□□□□□ -0.3
CCDC60-201ENST00000327554 TRIM56Q9BRZ2 755 aaKnown RBP13.19□□□□□ -0.3
CCDC60-201ENST00000327554 RRN3Q9NYV6 651 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 RNF11Q9Y3C5 154 aa13.19□□□□□ -0.3
CCDC60-201ENST00000327554 FAM159BA6NKW6 160 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 ITGBL1O95965 494 aaPredicted RBP13.18□□□□□ -0.3
CCDC60-201ENST00000327554 SERPINB2P05120 415 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 KRT7P08729 469 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 KCNA4P22459 653 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 PSMA2P25787 234 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 STAT2P52630 851 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 SOX10P56693 466 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 KLF10Q13118 480 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 XKR9Q5GH70 373 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 STXBP5Q5T5C0 1151 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 RC3H1Q5TC82 1133 aaKnown RBP13.18□□□□□ -0.3
CCDC60-201ENST00000327554 NPNTQ6UXI9 565 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 UNC5AQ6ZN44 842 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 TIFABQ6ZNK6 161 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 LPCAT2Q7L5N7 544 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 UBR7Q8N806 425 aa13.18□□□□□ -0.3
CCDC60-201ENST00000327554 SPATA18Q8TC71 538 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms