RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ZNF211Q13398 564 aaPredicted RBP13.28□□□□□ -0.28
DDX39A-202ENST00000324340 GLE1Q53GS7 698 aaKnown RBP13.28□□□□□ -0.28
DDX39A-202ENST00000324340 RAB6CQ53S08 254 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 DCAF6Q58WW2 860 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 CCDC181Q5TID7 509 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 OTUD1Q5VV17 481 aaPredicted RBP13.28□□□□□ -0.28
DDX39A-202ENST00000324340 SYPL2Q5VXT5 272 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 BSPRYQ5W0U4 402 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 TXNRD3NBQ6F5E7 133 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 FAM109BQ6ICB4 259 aaPredicted RBP13.28□□□□□ -0.28
DDX39A-202ENST00000324340 DENND5BQ6ZUT9 1274 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 MON1AQ86VX9 555 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 TCEAL8Q8IYN2 117 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 RCOR2Q8IZ40 523 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 CMASQ8NFW8 434 aaPredicted RBP13.28□□□□□ -0.28
DDX39A-202ENST00000324340 SAMD11Q96NU1 681 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 TBCBQ99426 244 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 SEPT5Q99719 369 aaPredicted RBP13.28□□□□□ -0.28
DDX39A-202ENST00000324340 GDF15Q99988 308 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 TTLL2Q9BWV7 592 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 RAB6CQ9H0N0 254 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 EHD2Q9NZN4 543 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 NAALADL1Q9UQQ1 740 aa13.28□□□□□ -0.28
DDX39A-202ENST00000324340 ARHGEF15O94989 841 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 SEC24AO95486 1093 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 CNPP09543 421 aaKnown RBP13.27□□□□□ -0.29
DDX39A-202ENST00000324340 DNAJB2P25686 324 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 PTPN7P35236 360 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 SSR1P43307 286 aaKnown RBP13.27□□□□□ -0.29
DDX39A-202ENST00000324340 COPS2P61201 443 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 YWHAGP61981 247 aaKnown RBP eCLIP13.27□□□□□ -0.29
DDX39A-202ENST00000324340 USP46P62068 366 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 ATP11AP98196 1134 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 BOLA3Q53S33 107 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 SEL1L2Q5TEA6 688 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 SDHAF4Q5VUM1 108 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 SCD5Q86SK9 330 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 ARHGAP18Q8N392 663 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 MAB21L3Q8N8X9 362 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 SPATA4Q8NEY3 305 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 SPPL3Q8TCT6 385 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 TEKT4Q8WW24 435 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 AUTS2Q8WXX7 1259 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 PEBP4Q96S96 227 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 NAP1L3Q99457 506 aaPredicted RBP13.27□□□□□ -0.29
DDX39A-202ENST00000324340 C17orf80Q9BSJ5 609 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 NGRNQ9NPE2 291 aaKnown RBP13.27□□□□□ -0.29
DDX39A-202ENST00000324340 ABCC13Q9NSE7 274 aa13.27□□□□□ -0.29
DDX39A-202ENST00000324340 C3orf70A6NLC5 250 aaPredicted RBP13.26□□□□□ -0.29
DDX39A-202ENST00000324340 SLC38A8A6NNN8 435 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 GRXCR1A8MXD5 290 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 CAPN9O14815 690 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 FSCN2O14926 492 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 MDM4O15151 490 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 PRPSAP2O60256 369 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 SOAT2O75908 522 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 CXCL14O95715 111 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 C1RP00736 705 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 IGLV3-25P01717 112 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 FGGP02679 453 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 CA3P07451 260 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 RARAP10276 462 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 NCAM1P13591 858 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 MYOGP15173 224 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 YWHAQP27348 245 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 SULT1E1P49888 294 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 ARSEP51690 589 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 ERVFC1P60507 584 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 EIF4EBP2Q13542 120 aaPredicted RBP13.26□□□□□ -0.29
DDX39A-202ENST00000324340 TAZQ16635 292 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 CDO1Q16878 200 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 ATP13A4Q4VNC1 1196 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 CEP85LQ5SZL2 805 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 AADACL2Q6P093 401 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 LILRA6Q6PI73 481 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 VSIG1Q86XK7 387 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 SLC13A5Q86YT5 568 aaPredicted RBP13.26□□□□□ -0.29
DDX39A-202ENST00000324340 MREGQ8N565 214 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 ARFGAP2Q8N6H7 521 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 EIF1ADQ8N9N8 165 aaKnown RBP13.26□□□□□ -0.29
DDX39A-202ENST00000324340 RBM41Q96IZ5 413 aaKnown RBP13.26□□□□□ -0.29
DDX39A-202ENST00000324340 SLITRK1Q96PX8 696 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 RUFY1Q96T51 708 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 SMARCAL1Q9NZC9 954 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 PCSK1NQ9UHG2 260 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 EFR3BQ9Y2G0 817 aa13.26□□□□□ -0.29
DDX39A-202ENST00000324340 ZNF638Q14966 1978 aaKnown RBP13.26□□□□□ -0.29
DDX39A-202ENST00000324340 KLHL33A6NCF5 533 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 CCDC188H7C350 402 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 M0QYT0 321 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 F9P00740 461 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 KRT1P04264 644 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 ZDHHC11BP0C7U3 371 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 DNAJB1P25685 340 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 PGFP49763 221 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 AIF1P55008 147 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 ERVK-21P61565 698 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 PITX1P78337 314 aaPredicted RBP13.25□□□□□ -0.29
DDX39A-202ENST00000324340 SNCBQ16143 134 aa13.25□□□□□ -0.29
DDX39A-202ENST00000324340 PPP2R5EQ16537 467 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms