RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 TFIP11Q9UBB9 837 aaKnown RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 HOOK1Q9UJC3 728 aaKnown RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 SYCE3A1L190 88 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 EFCAB7A8K855 629 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 PFKFB1P16118 471 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 WT1P19544 449 aaPredicted RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 MARCKSP29966 332 aaPredicted RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 ME1P48163 572 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 NLRP5P59047 1200 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 CYP4F2P78329 520 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 MBTD1Q05BQ5 628 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 PDIA5Q14554 519 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 STX1AQ16623 288 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 FOXD4L5Q5VV16 416 aaPredicted RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 TYW1BQ6NUM6 668 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 TP53INP2Q8IXH6 220 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 ETFBKMTQ8IXQ9 262 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 FSIP1Q8NA03 581 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 C3orf58Q8NDZ4 430 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 PRPF31Q8WWY3 499 aaKnown RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 FOXD4L4Q8WXT5 416 aaPredicted RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 PRCCQ92733 491 aaPredicted RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 ABCG4Q9H172 646 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 RBSNQ9H1K0 784 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 FAM13BQ9NYF5 915 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 KCNJ14Q9UNX9 436 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 TTLL8A6PVC2 850 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 PODXLO00592 558 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 IKBKBO14920 756 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 ZNF202O95125 648 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 WNT1P04628 370 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 SRGAP2CP0DJJ0 459 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 CIITAP33076 1130 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 QARSP47897 775 aaKnown RBP7.07□□□□□ -1.28
CSTF3-201ENST00000323959 NXPH1P58417 271 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 RNASE9P60153 205 aaKnown RBP7.07□□□□□ -1.28
CSTF3-201ENST00000323959 GNL2Q13823 731 aaKnown RBP7.07□□□□□ -1.28
CSTF3-201ENST00000323959 ZRSR2Q15696 482 aaKnown RBP7.07□□□□□ -1.28
CSTF3-201ENST00000323959 E2F4Q16254 413 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 HYIQ5T013 277 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 BIVMQ86UB2 503 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 VASH2Q86V25 355 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 DTX1Q86Y01 620 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 OTUB2Q96DC9 234 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 ABHD17AQ96GS6 310 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 CCDC34Q96HJ3 373 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 DUSP9Q99956 384 aaKnown RBP7.07□□□□□ -1.28
CSTF3-201ENST00000323959 ORAI3Q9BRQ5 295 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 LINC00597Q9H2U6 94 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 KIAA1468Q9P260 1216 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 A0A1B0GVM2 712 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 ACTN4O43707 911 aaKnown RBP7.07□□□□□ -1.28
CSTF3-201ENST00000323959 MAGEC1O60732 1142 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 ALPPL2P10696 532 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 MUTP22033 750 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 NDUFA8P51970 172 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 GUCY1B3Q02153 619 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 TYRO3Q06418 890 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 NR5A1Q13285 461 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 MXD4Q14582 209 aaPredicted RBP7.07□□□□□ -1.28
CSTF3-201ENST00000323959 UBE2SQ16763 222 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 ZRANB3Q5FWF4 1079 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 BTBD8Q5XKL5 378 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 TXNDC8Q6A555 127 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 KRBA2Q6ZNG9 492 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 RAB11FIP4Q86YS3 637 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 JAMLQ86YT9 394 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 CHPFQ8IZ52 775 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 RNF149Q8NC42 400 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 PRR7Q8TB68 274 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 APOBEC4Q8WW27 367 aaKnown RBP7.07□□□□□ -1.28
CSTF3-201ENST00000323959 SIPA1Q96FS4 1042 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 GJB4Q9NTQ9 266 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 ANO10Q9NW15 660 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 GCNT4Q9P109 453 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 DEC1Q9P2X7 70 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 HCN2Q9UL51 889 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 SAMM50Q9Y512 469 aa7.07□□□□□ -1.28
CSTF3-201ENST00000323959 NIPBLQ6KC79 2804 aaeCLIP7.06□□□□□ -1.28
CSTF3-201ENST00000323959 PLXNA2O75051 1894 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 PRSS44E7EML9 344 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 PLD2O14939 933 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 ACADMP11310 421 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 TGIF1Q15583 401 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 EIF2S3LQ2VIR3 472 aaKnown RBP7.06□□□□□ -1.28
CSTF3-201ENST00000323959 Q4G0T1 1027 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 EARS2Q5JPH6 523 aaKnown RBP7.06□□□□□ -1.28
CSTF3-201ENST00000323959 GRAMD4Q6IC98 578 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 DDX42Q86XP3 938 aaKnown RBP eCLIP7.06□□□□□ -1.28
CSTF3-201ENST00000323959 IGSF22Q8N9C0 903 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 TMEM159Q96B96 161 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 TRMT2BQ96GJ1 504 aaKnown RBP7.06□□□□□ -1.28
CSTF3-201ENST00000323959 C6orf106Q9H6K1 298 aaPredicted RBP7.06□□□□□ -1.28
CSTF3-201ENST00000323959 SGK2Q9HBY8 427 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 NBASA2RRP1 2371 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 IGLV3-22A0A075B6J6 115 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 SMCO2A6NFE2 343 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 PRICKLE3O43900 615 aaPredicted RBP7.06□□□□□ -1.28
CSTF3-201ENST00000323959 SLFN14P0C7P3 912 aa7.06□□□□□ -1.28
CSTF3-201ENST00000323959 SYKP43405 635 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms