RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 ZWINTO95229 277 aa12.45□□□□□ -0.42
NCL-201ENST00000322723 CYP2C9P11712 490 aa12.45□□□□□ -0.42
NCL-201ENST00000322723 ALADP13716 330 aa12.45□□□□□ -0.42
NCL-201ENST00000322723 PURAQ00577 322 aaKnown RBP12.45□□□□□ -0.42
NCL-201ENST00000322723 ZBTB16Q05516 673 aa12.45□□□□□ -0.42
NCL-201ENST00000322723 EFTUD2Q15029 972 aaKnown RBP eCLIP12.45□□□□□ -0.422e-6■■■□□ 15
NCL-201ENST00000322723 PRKD1Q15139 912 aaPredicted RBP12.45□□□□□ -0.42
NCL-201ENST00000322723 NCBP2-AS2Q69YL0 99 aa12.45□□□□□ -0.42
NCL-201ENST00000322723 CHSY1Q86X52 802 aa12.45□□□□□ -0.42
NCL-201ENST00000322723 RASAL3Q86YV0 1011 aa12.45□□□□□ -0.42
NCL-201ENST00000322723 PGAP3Q96FM1 320 aaPredicted RBP12.45□□□□□ -0.42
NCL-201ENST00000322723 KCTD15Q96SI1 283 aaPredicted RBP12.45□□□□□ -0.42
NCL-201ENST00000322723 IPPQ9Y573 584 aa12.45□□□□□ -0.42
NCL-201ENST00000322723 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.45□□□□□ -0.42
NCL-201ENST00000322723 SNX9Q9Y5X1 595 aa12.45□□□□□ -0.42
NCL-201ENST00000322723 APOL1O14791 398 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 TM9SF1O15321 606 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 PRPSAP2O60256 369 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 PHBP35232 272 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 SEMA5AQ13591 1074 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 SRRM1Q8IYB3 904 aaKnown RBP12.44□□□□□ -0.42
NCL-201ENST00000322723 CLEC4CQ8WTT0 213 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 APBB2Q92870 758 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 NPY6RQ99463 290 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 FGFR1OP2Q9NVK5 253 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 IGF2BP3O00425 579 aaKnown RBP eCLIP12.44□□□□□ -0.428e-8■□□□□ 9
NCL-201ENST00000322723 HCRTO43612 131 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 LMO2P25791 158 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 CPT1AP50416 773 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 YARSP54577 528 aaKnown RBP12.44□□□□□ -0.42
NCL-201ENST00000322723 SCAPQ12770 1279 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 EIF4EBP2Q13542 120 aaPredicted RBP12.44□□□□□ -0.42
NCL-201ENST00000322723 LAMB3Q13751 1172 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 TMED2Q15363 201 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 SLC1A5Q15758 541 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 KIAA0319Q5VV43 1072 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 CATSPER4Q7RTX7 472 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 RSAD2Q8WXG1 361 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 ALKBH8Q96BT7 664 aaKnown RBP12.44□□□□□ -0.42
NCL-201ENST00000322723 PAFAH2Q99487 392 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 RNF39Q9H2S5 420 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 SYNCQ9H7C4 482 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 EIF2B3Q9NR50 452 aaKnown RBP12.44□□□□□ -0.42
NCL-201ENST00000322723 BATF3Q9NR55 127 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 ARL2BPQ9Y2Y0 163 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 A0A1W2PPM1 405 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 EME2A4GXA9 379 aaPredicted RBP12.44□□□□□ -0.42
NCL-201ENST00000322723 HACD1B0YJ81 288 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 INPPL1O15357 1258 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 EDF1O60869 148 aaKnown RBP12.44□□□□□ -0.42
NCL-201ENST00000322723 DYNLT1P63172 113 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 SV2CQ496J9 727 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 SLC45A4Q5BKX6 768 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 CYP4F22Q6NT55 531 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 ZNF449Q6P9G9 518 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 SPATA21Q7Z572 469 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 FAM228AQ86W67 206 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 MAP7D3Q8IWC1 876 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 TGS1Q96RS0 853 aaKnown RBP12.44□□□□□ -0.42
NCL-201ENST00000322723 LPIN3Q9BQK8 851 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 PAPOLBQ9NRJ5 636 aaKnown RBP12.44□□□□□ -0.42
NCL-201ENST00000322723 ABCF3Q9NUQ8 709 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 ETNK2Q9NVF9 386 aa12.44□□□□□ -0.42
NCL-201ENST00000322723 TRDMT1O14717 391 aaKnown RBP12.43□□□□□ -0.42
NCL-201ENST00000322723 TREHO43280 583 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 ALDH1A2O94788 518 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 ZFXP17010 805 aaPredicted RBP12.43□□□□□ -0.42
NCL-201ENST00000322723 SSTR1P30872 391 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 SDC4P31431 198 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 PLCB3Q01970 1234 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 ZNF618Q5T7W0 954 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 MRPL10Q7Z7H8 261 aaKnown RBP12.43□□□□□ -0.42
NCL-201ENST00000322723 ZNF398Q8TD17 642 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 PKMYT1Q99640 499 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 DUSP16Q9BY84 665 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 SUDS3Q9H7L9 328 aaPredicted RBP12.43□□□□□ -0.42
NCL-201ENST00000322723 RXFP1Q9HBX9 757 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 HES2Q9Y543 173 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 NYNRINQ9P2P1 1898 aaKnown RBP12.43□□□□□ -0.42
NCL-201ENST00000322723 HHLA1C9JL84 531 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 RPA3P35244 121 aaPredicted RBP12.43□□□□□ -0.42
NCL-201ENST00000322723 MATKP42679 507 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 LILRA4P59901 499 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 RIPK1Q13546 671 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 DPYSQ14117 519 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 FRG1Q14331 258 aaKnown RBP12.43□□□□□ -0.42
NCL-201ENST00000322723 SLC25A52Q3SY17 297 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 NUGGCQ68CJ6 796 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 SCUBE3Q8IX30 993 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 GDAP1Q8TB36 358 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 CSPG4P5Q96PW8 444 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 KATNAL1Q9BW62 490 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 B3GNT5Q9BYG0 378 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 GREB1Q4ZG55 1949 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 TCRBV9S1A1TA0A576 114 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 TAF6P49848 677 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 NRLP54845 237 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 AIF1P55008 147 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 NCALDP61601 193 aa12.43□□□□□ -0.42
NCL-201ENST00000322723 PAFAH1B3Q15102 231 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms