RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 SPIDRQ14159 915 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 UBE2SQ16763 222 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 CCDC81Q6ZN84 652 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 PPIL6Q8IXY8 311 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 OR5J2Q8NH18 312 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 CASS4Q9NQ75 786 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 KDM6BO15054 1643 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 KCNQ3O43525 872 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 SOAT2O75908 522 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 CCNA2P20248 432 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 USP39Q53GS9 565 aaKnown RBP9.98□□□□□ -0.81
COL12A1-201ENST00000322507 THEMIS2Q5TEJ8 643 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 GALNT4Q8N4A0 578 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 AMER2Q8N7J2 671 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 GAL3ST3Q96A11 431 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 KIF12Q96FN5 646 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 ZNF184Q99676 751 aaPredicted RBP9.98□□□□□ -0.81
COL12A1-201ENST00000322507 KITP10721 976 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 PHKG1Q16816 387 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 HECTD3Q5T447 861 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 RNF19BQ6ZMZ0 732 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 THNSL1Q8IYQ7 743 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 SPIRE2Q8WWL2 714 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 SIPA1Q96FS4 1042 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 NT5C1AQ9BXI3 368 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 DMTF1Q9Y222 760 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 SNRNP35Q16560 246 aaKnown RBP9.98□□□□□ -0.81
COL12A1-201ENST00000322507 PRR5LQ6MZQ0 368 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 BNC2Q6ZN30 1099 aaPredicted RBP9.98□□□□□ -0.81
COL12A1-201ENST00000322507 SMIM15Q7Z3B0 74 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 KBTBD8Q8NFY9 601 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 FAM49AQ9H0Q0 323 aaPredicted RBP9.98□□□□□ -0.81
COL12A1-201ENST00000322507 TRPV5Q9NQA5 729 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 PPLO60437 1756 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 ERP29P30040 261 aaKnown RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 GRK3P35626 688 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 TDGQ13569 410 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 NFE2L1Q14494 772 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 SULT1C3Q6IMI6 304 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 WDR49Q8IV35 697 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 ZNF638Q14966 1978 aaKnown RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 DIP2AQ14689 1571 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 EML1O00423 815 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 DDX6P26196 483 aaKnown RBP eCLIP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 TARSP26639 723 aaKnown RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 FAM76BQ5HYJ3 339 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 RD3Q7Z3Z2 195 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 SPERTQ8NA61 448 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 PDPRQ8NCN5 879 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 RORBQ92753 470 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 PPP1R36Q96LQ0 422 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 GSDMCQ9BYG8 508 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 AAR2Q9Y312 384 aaKnown RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 SH3BP1Q9Y3L3 701 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 ADGRA2Q96PE1 1338 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 CRB1P82279 1406 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 USP17L15C9J2P7 530 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 USP17L13C9JLJ4 530 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 USP17L11C9JVI0 530 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 USP17L18D6R9N7 530 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 USP17L22D6RA61 530 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 USP17L17D6RBQ6 530 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 USP17L19D6RCP7 530 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 USP17L20D6RJB6 530 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 USP17L24Q0WX57 530 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 NCOA4Q13772 614 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 NR1I3Q14994 352 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 DDR2Q16832 855 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 SNX30Q5VWJ9 437 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 MOXD1Q6UVY6 613 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 SPATA2LQ8IUW3 424 aaPredicted RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 SP8Q8IXZ3 490 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 LNX2Q8N448 690 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 SPATA18Q8TC71 538 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 GPN1Q9HCN4 374 aaPredicted RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 SPASTQ9UBP0 616 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 SNX6Q9UNH7 406 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 TRIM43BA6NCK2 446 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 SRP72O76094 671 aaKnown RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 SOX11P35716 441 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 FXR2P51116 673 aaKnown RBP eCLIP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 TIGD7Q6NT04 549 aaPredicted RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 GALNT18Q6P9A2 607 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 RBM12BQ8IXT5 1001 aaKnown RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 PRMT1Q99873 361 aaKnown RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 EPB41L4AQ9HCS5 686 aaPredicted RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 RRN3P2A6NIE6 340 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 PDK2Q15119 407 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 KYNUQ16719 465 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 HIST2H2ACQ16777 129 aaPredicted RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 HSD17B12Q53GQ0 312 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 HIST2H2AA3Q6FI13 130 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 DNAAF5Q86Y56 855 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 SH3RF3Q8TEJ3 882 aaPredicted RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 PROX1Q92786 737 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 RIT2Q99578 217 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 ANKEF1Q9NU02 776 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 MINPP1Q9UNW1 487 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 PTPN1P18031 435 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms