RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 TNIP3Q96KP6 325 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 CSPG4P5Q96PW8 444 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 KCTD15Q96SI1 283 aaPredicted RBP23.16■■□□□ 1.3
PNKP-201ENST00000322344 TSSK1BQ9BXA7 367 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 IQCGQ9H095 443 aaKnown RBP23.16■■□□□ 1.3
PNKP-201ENST00000322344 SAR1AQ9NR31 198 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 MTMR10Q9NXD2 777 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 TRIM33Q9UPN9 1127 aa23.16■■□□□ 1.3
PNKP-201ENST00000322344 TRIM49D1C9J1S8 452 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 COPEO14579 308 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 WFS1O76024 890 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 PDGFRBP09619 1106 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 FAM110CQ1W6H9 321 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 PARK7Q99497 189 aaKnown RBP23.15■■□□□ 1.3
PNKP-201ENST00000322344 LPIN3Q9BQK8 851 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 APOL6Q9BWW8 343 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 MKS1Q9NXB0 559 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 STK38LQ9Y2H1 464 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 KAT6AQ92794 2004 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 KLF11O14901 512 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 DYNC1LI2O43237 492 aaPredicted RBP23.15■■□□□ 1.3
PNKP-201ENST00000322344 CCND1P24385 295 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 SARNPP82979 210 aaKnown RBP23.15■■□□□ 1.3
PNKP-201ENST00000322344 SEMA5AQ13591 1074 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 HEATR6Q6AI08 1181 aaKnown RBP23.15■■□□□ 1.3
PNKP-201ENST00000322344 KCNT2Q6UVM3 1135 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 TRIM42Q8IWZ5 723 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 GSDMBQ8TAX9 411 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 FAM111AQ96PZ2 611 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 EBNA1BP2Q99848 306 aaKnown RBP23.15■■□□□ 1.3
PNKP-201ENST00000322344 ZFP69BQ9UJL9 534 aa23.15■■□□□ 1.3
PNKP-201ENST00000322344 XPO1O14980 1071 aaKnown RBP23.14■■□□□ 1.29
PNKP-201ENST00000322344 ADCY6O43306 1168 aa23.14■■□□□ 1.29
PNKP-201ENST00000322344 KRT38O76015 456 aa23.14■■□□□ 1.29
PNKP-201ENST00000322344 MAP3K6O95382 1288 aa23.14■■□□□ 1.29
PNKP-201ENST00000322344 METTL18O95568 372 aa23.14■■□□□ 1.29
PNKP-201ENST00000322344 AKAP5P24588 427 aa23.14■■□□□ 1.29
PNKP-201ENST00000322344 ARL4AP40617 200 aa23.14■■□□□ 1.29
PNKP-201ENST00000322344 MATKP42679 507 aa23.14■■□□□ 1.29
PNKP-201ENST00000322344 SLC10A2Q12908 348 aaPredicted RBP23.14■■□□□ 1.29
PNKP-201ENST00000322344 NPLOC4Q8TAT6 608 aa23.14■■□□□ 1.29
PNKP-201ENST00000322344 SLC2A14Q8TDB8 520 aa23.14■■□□□ 1.29
PNKP-201ENST00000322344 SIGLEC10Q96LC7 697 aa23.14■■□□□ 1.29
PNKP-201ENST00000322344 GJD2Q9UKL4 321 aa23.14■■□□□ 1.29
PNKP-201ENST00000322344 PIN4Q9Y237 131 aaKnown RBP23.14■■□□□ 1.29
PNKP-201ENST00000322344 LMO2P25791 158 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 FDFT1P37268 417 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 CCNFP41002 786 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 PRKD1Q15139 912 aaPredicted RBP23.13■■□□□ 1.29
PNKP-201ENST00000322344 NCBP2-AS2Q69YL0 99 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 UNC5AQ6ZN44 842 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 RPAINQ86UA6 219 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 HACE1Q8IYU2 909 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 TUBB6Q9BUF5 446 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 C12orf65Q9H3J6 166 aaKnown RBP23.13■■□□□ 1.29
PNKP-201ENST00000322344 PLAC1Q9HBJ0 212 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 IQCA1LA6NCM1 817 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 TRAFD1O14545 582 aaPredicted RBP23.13■■□□□ 1.29
PNKP-201ENST00000322344 SPTLC1O15269 473 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 HCRTO43612 131 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 HUS1O60921 280 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 DGKIO75912 1065 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 NEFHP12036 1026 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 YBX3P16989 372 aaKnown RBP eCLIP23.13■■□□□ 1.29
PNKP-201ENST00000322344 WARSP23381 471 aaKnown RBP23.13■■□□□ 1.29
PNKP-201ENST00000322344 TARSP26639 723 aaKnown RBP23.13■■□□□ 1.29
PNKP-201ENST00000322344 SERPINB4P48594 390 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 SERPINB9P50453 376 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 ATXN1P54253 815 aaKnown RBP23.13■■□□□ 1.29
PNKP-201ENST00000322344 SLC8A3P57103 927 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 CDK16Q00536 496 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 MFSD10Q14728 455 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 SNX17Q15036 470 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 E2F5Q15329 346 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 CYS1Q717R9 158 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 ZNF534Q76KX8 674 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 TOP6BLQ8N6T0 577 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 CCDC185Q8N715 623 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 TFB1MQ8WVM0 346 aaKnown RBP23.13■■□□□ 1.29
PNKP-201ENST00000322344 PTPRN2Q92932 1015 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 TTC17Q96AE7 1141 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 SRPK1Q96SB4 655 aaKnown RBP23.13■■□□□ 1.29
PNKP-201ENST00000322344 DTLQ9NZJ0 730 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 MTO1Q9Y2Z2 717 aaKnown RBP23.13■■□□□ 1.29
PNKP-201ENST00000322344 USP3Q9Y6I4 520 aa23.13■■□□□ 1.29
PNKP-201ENST00000322344 TRIP11Q15643 1979 aa23.12■■□□□ 1.29
PNKP-201ENST00000322344 FAM159BA6NKW6 160 aa23.12■■□□□ 1.29
PNKP-201ENST00000322344 DAB1O75553 588 aa23.12■■□□□ 1.29
PNKP-201ENST00000322344 FAM163BP0C2L3 166 aa23.12■■□□□ 1.29
PNKP-201ENST00000322344 SLC25A52Q3SY17 297 aa23.12■■□□□ 1.29
PNKP-201ENST00000322344 ADGRF2Q8IZF7 708 aa23.12■■□□□ 1.29
PNKP-201ENST00000322344 AGAP11Q8TF27 550 aa23.12■■□□□ 1.29
PNKP-201ENST00000322344 TBC1D31Q96DN5 1066 aa23.12■■□□□ 1.29
PNKP-201ENST00000322344 OLFM3Q96PB7 478 aa23.12■■□□□ 1.29
PNKP-201ENST00000322344 ZNF408Q9H9D4 720 aa23.12■■□□□ 1.29
PNKP-201ENST00000322344 HAO1Q9UJM8 370 aa23.12■■□□□ 1.29
PNKP-201ENST00000322344 FZD10Q9ULW2 581 aa23.12■■□□□ 1.29
PNKP-201ENST00000322344 GNEQ9Y223 722 aaKnown RBP23.12■■□□□ 1.29
PNKP-201ENST00000322344 PCDHA11Q9Y5I1 949 aa23.12■■□□□ 1.29
PNKP-201ENST00000322344 CXorf49A8MYA2 514 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms