RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CLNKQ7Z7G1 428 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 SAMD3Q8N6K7 520 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 ART4Q93070 314 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 AP4E1Q9UPM8 1137 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 DNAJC16Q9Y2G8 782 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 LAMA4Q16363 1823 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 MROH7Q68CQ1 1323 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 CASTOR2A6NHX0 329 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 PEX11AO75192 247 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 CHRM1P11229 460 aaPredicted RBP15.74■□□□□ 0.11
VARS2-201ENST00000321897 USP46P62068 366 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 PPIDQ08752 370 aaKnown RBP15.74■□□□□ 0.11
VARS2-201ENST00000321897 FLOT2Q14254 428 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 TRIM74Q86UV6 250 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 TRIM73Q86UV7 250 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 GPRC5AQ8NFJ5 357 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 PHF12Q96QT6 1004 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 EFHD1Q9BUP0 239 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 LRMDAQ9H2I8 198 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 SLC17A7Q9P2U7 560 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 MYH7P12883 1935 aa15.74■□□□□ 0.11
VARS2-201ENST00000321897 EEF2KO00418 725 aaKnown RBP15.73■□□□□ 0.11
VARS2-201ENST00000321897 ZNF189O75820 626 aaPredicted RBP15.73■□□□□ 0.11
VARS2-201ENST00000321897 BEX3Q00994 111 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 NSUN2Q08J23 767 aaKnown RBP eCLIP15.73■□□□□ 0.11
VARS2-201ENST00000321897 ATP1A4Q13733 1029 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 MORF4L2Q15014 288 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 SLC45A4Q5BKX6 768 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 FSCBQ5H9T9 825 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 IFNEQ86WN2 208 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 ARL10Q8N8L6 244 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 SLC2A14Q8TDB8 520 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 ALKBH8Q96BT7 664 aaKnown RBP15.73■□□□□ 0.11
VARS2-201ENST00000321897 MBOAT7Q96N66 472 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 CCDC90BQ9GZT6 254 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 STARD13Q9Y3M8 1113 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 RTN3O95197 1032 aaPredicted RBP15.73■□□□□ 0.11
VARS2-201ENST00000321897 RAG1P15918 1043 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 RPS12P25398 132 aaKnown RBP15.73■□□□□ 0.11
VARS2-201ENST00000321897 PMLP29590 882 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 PCYT1AP49585 367 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 TGFB2P61812 414 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 PTK6Q13882 451 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 ANKRD22Q5VYY1 191 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 ZNF572Q7Z3I7 529 aaPredicted RBP15.73■□□□□ 0.11
VARS2-201ENST00000321897 GSTCDQ8NEC7 633 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 ANKRD27Q96NW4 1050 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 CNPY3Q9BT09 278 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 KLHL4Q9C0H6 718 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 TASP1Q9H6P5 420 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 LRRC19Q9H756 370 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 MYH14Q7Z406 1995 aaKnown RBP15.73■□□□□ 0.11
VARS2-201ENST00000321897 BTNL10A8MVZ5 291 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 ACKR2O00590 384 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 EDF1O60869 148 aaKnown RBP15.73■□□□□ 0.11
VARS2-201ENST00000321897 FESP07332 822 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 KDELR1P24390 212 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 TRMT5Q32P41 509 aaKnown RBP15.73■□□□□ 0.11
VARS2-201ENST00000321897 VSTM1Q6UX27 236 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 ABHD15Q6UXT9 468 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 FASTKD5Q7L8L6 764 aaKnown RBP15.73■□□□□ 0.11
VARS2-201ENST00000321897 TMPRSS6Q8IU80 811 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 GALNT15Q8N3T1 639 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 RNPEPQ9H4A4 650 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 PLEKHA5Q9HAU0 1116 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 ABT1Q9ULW3 272 aaKnown RBP15.73■□□□□ 0.11
VARS2-201ENST00000321897 V9GYQ6 96 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 ZNF536O15090 1300 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 SDK1Q7Z5N4 2213 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 UBA6A0AVT1 1052 aaPredicted RBP15.73■□□□□ 0.11
VARS2-201ENST00000321897 CYP2F1P24903 491 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 USP10Q14694 798 aaKnown RBP15.73■□□□□ 0.11
VARS2-201ENST00000321897 KCNT2Q6UVM3 1135 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 NIPA1Q7RTP0 329 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 SH3TC2Q8TF17 1288 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 ATP6V1E2Q96A05 226 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 CACNG4Q9UBN1 327 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 PLIN4Q96Q06 1357 aa15.73■□□□□ 0.11
VARS2-201ENST00000321897 TTC36A6NLP5 189 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 SCAMP3O14828 347 aaKnown RBP15.72■□□□□ 0.11
VARS2-201ENST00000321897 ATP6V1G1O75348 118 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 ADIGQ0VDE8 80 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 SLC39A4Q6P5W5 647 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 MARK2Q7KZI7 788 aaKnown RBP15.72■□□□□ 0.11
VARS2-201ENST00000321897 SLFN11Q7Z7L1 901 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 PCDH9Q9HC56 1237 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 CYP4F12Q9HCS2 524 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 PTPRHQ9HD43 1115 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 A0A1B0GVG6 124 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 E7ENQ6 273 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 CCDC92Q53HC0 331 aaPredicted RBP15.72■□□□□ 0.11
VARS2-201ENST00000321897 ACSBG2Q5FVE4 666 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 LRRC8EQ6NSJ5 796 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 LENG1Q96BZ8 264 aaPredicted RBP15.72■□□□□ 0.11
VARS2-201ENST00000321897 TNIP3Q96KP6 325 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 MFSD14AQ96MC6 490 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 NMUR2Q9GZQ4 415 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 AVENQ9NQS1 362 aaPredicted RBP15.72■□□□□ 0.11
VARS2-201ENST00000321897 GSC2O15499 205 aa15.72■□□□□ 0.11
VARS2-201ENST00000321897 KDM1AO60341 852 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms