RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 CXorf21Q9HAI6 301 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 ASNSD1Q9NWL6 643 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 MRPL11Q9Y3B7 192 aaKnown RBP17.11■□□□□ 0.33
PACS1-201ENST00000320580 UGT1A9O60656 530 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 ZNF23P17027 643 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 UGT1A6P19224 532 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 UGT1A1P22309 533 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 UGT1A4P22310 534 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 UGT1A3P35503 534 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 UGT1A5P35504 534 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 ARSHQ5FYA8 562 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 C1QTNF12Q5T7M4 302 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 CYP4A22Q5TCH4 519 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 TMEM214Q6NUQ4 689 aaKnown RBP17.11■□□□□ 0.33
PACS1-201ENST00000320580 CCDC81Q6ZN84 652 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 PTCD3Q96EY7 689 aaKnown RBP17.11■□□□□ 0.33
PACS1-201ENST00000320580 CORO1BQ9BR76 489 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 UGT1A7Q9HAW7 530 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 UGT1A10Q9HAW8 530 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 UGT1A8Q9HAW9 530 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 TRIM39Q9HCM9 518 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 DISP2A7MBM2 1401 aa17.11■□□□□ 0.33
PACS1-201ENST00000320580 SH3PXD2BA1X283 911 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 TBX3O15119 743 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 GSTA4O15217 222 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 CAPN1P07384 714 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 CDH15P55291 814 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 TPTEP56180 551 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 PSMC5P62195 406 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 TTLL12Q14166 644 aaPredicted RBP17.1■□□□□ 0.33
PACS1-201ENST00000320580 EFHC2Q5JST6 749 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 ALLCQ8N6M5 410 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 CD209Q9NNX6 404 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 AAASQ9NRG9 546 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 SLC26A4O43511 780 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 TUFMP49411 452 aaKnown RBP17.1■□□□□ 0.33
PACS1-201ENST00000320580 CLK1P49759 484 aaKnown RBP17.1■□□□□ 0.33
PACS1-201ENST00000320580 INHBCP55103 352 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 HEATR6Q6AI08 1181 aaKnown RBP17.1■□□□□ 0.33
PACS1-201ENST00000320580 ZNF34Q8IZ26 560 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 SIX2Q9NPC8 291 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 PNPOQ9NVS9 261 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 CSE1LP55060 971 aaKnown RBP17.1■□□□□ 0.33
PACS1-201ENST00000320580 NFIXQ14938 502 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 HABP4Q5JVS0 413 aaKnown RBP17.1■□□□□ 0.33
PACS1-201ENST00000320580 DPY19L2Q6NUT2 758 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 EXT2Q93063 718 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 PLEKHA8Q96JA3 519 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 DCDC2Q9UHG0 476 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 RGPD2P0DJD1 1756 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 TRIM64CA6NLI5 447 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 BAG6P46379 1132 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 CD97P48960 835 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 BCAP31P51572 246 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 TAS2R40P59535 323 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 DEFA1P59665 94 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 DEFA3P59666 94 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 EN1Q05925 392 aaPredicted RBP17.1■□□□□ 0.33
PACS1-201ENST00000320580 KATNAL2Q8IYT4 538 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 CENPSQ8N2Z9 138 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 BANPQ8N9N5 519 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 DACT3Q96B18 629 aaPredicted RBP17.1■□□□□ 0.33
PACS1-201ENST00000320580 CCDC17Q96LX7 622 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 CIB1Q99828 191 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 DGCR6LQ9BY27 220 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 RAD21L1Q9H4I0 556 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 ZNF395Q9H8N7 513 aaPredicted RBP17.1■□□□□ 0.33
PACS1-201ENST00000320580 VPS45Q9NRW7 570 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 ITGA11Q9UKX5 1188 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 BAG5Q9UL15 447 aa17.1■□□□□ 0.33
PACS1-201ENST00000320580 HEATR9A2RTY3 570 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 PSMA4P25789 261 aaKnown RBP17.09■□□□□ 0.33
PACS1-201ENST00000320580 RAB15P59190 212 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 DNAI2Q9GZS0 605 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 TEKT2Q9UIF3 430 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 TCRBV9S1A1TA0A576 114 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 TISP43B9A030 160 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 CLASP2O75122 1294 aaKnown RBP17.09■□□□□ 0.33
PACS1-201ENST00000320580 FAM155BO75949 473 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 TNNC2P02585 160 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 FAM86B2P0C5J1 330 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 SPATA31D3P0C874 917 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 STIP1P31948 543 aaKnown RBP17.09■□□□□ 0.33
PACS1-201ENST00000320580 S100A5P33763 92 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 ACTR2P61160 394 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 BNIP3Q12983 259 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 ADGRD1Q6QNK2 874 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 SPATA31D4Q6ZUB0 917 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 PLEKHO2Q8TD55 490 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 ADAMTS6Q9UKP5 1117 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 FAM208AQ9UK61 1670 aaKnown RBP17.09■□□□□ 0.33
PACS1-201ENST00000320580 ATRNO75882 1429 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 TNS2Q63HR2 1409 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 MSH4O15457 936 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 ITM2AO43736 263 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 GDF11O95390 407 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 MMP10P09238 476 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 OGFOD2Q6N063 350 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 ZNF677Q86XU0 584 aa17.09■□□□□ 0.33
PACS1-201ENST00000320580 RNF135Q8IUD6 432 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms