RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 FPGSQ05932 587 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 EFHC2Q5JST6 749 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 CNKSR3Q6P9H4 555 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 DARS2Q6PI48 645 aaKnown RBP14.73□□□□□ -0.05
VRK3-201ENST00000316763 CAPN12Q6ZSI9 719 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 C16orf59Q7L2K0 433 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 UNC45BQ8IWX7 931 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 PALM2Q8IXS6 379 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 FUKQ8N0W3 1084 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 SPATA18Q8TC71 538 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.73□□□□□ -0.05
VRK3-201ENST00000316763 KBTBD7Q8WVZ9 684 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 RXFP2Q8WXD0 754 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 KLHL14Q9P2G3 628 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 TSPAN16Q9UKR8 245 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 NME7Q9Y5B8 376 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 NR2E3Q9Y5X4 410 aa14.73□□□□□ -0.05
VRK3-201ENST00000316763 C2CD4BA6NLJ0 364 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 E7ESA3 106 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 ENDOD1O94919 500 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 SETSIPP0DME0 302 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 TAC1P20366 129 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 IGFBP6P24592 240 aaPredicted RBP14.72□□□□□ -0.05
VRK3-201ENST00000316763 CLCNKBP51801 687 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 RNASELQ05823 741 aaKnown RBP14.72□□□□□ -0.05
VRK3-201ENST00000316763 ADCY1Q08828 1119 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 PPIGQ13427 754 aaKnown RBP eCLIP14.72□□□□□ -0.052e-6■■■■□ 20.1
VRK3-201ENST00000316763 KRT81Q14533 505 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 PDK2Q15119 407 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 ZKSCAN8Q15776 578 aaPredicted RBP14.72□□□□□ -0.05
VRK3-201ENST00000316763 UPP1Q16831 310 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 BOLA3Q53S33 107 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 TOP6BLQ8N6T0 577 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 FAM71DQ8N9W8 422 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 PITPNM3Q9BZ71 974 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 ELAC1Q9H777 363 aaKnown RBP14.72□□□□□ -0.05
VRK3-201ENST00000316763 SSU72Q9NP77 194 aaKnown RBP14.72□□□□□ -0.05
VRK3-201ENST00000316763 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.72□□□□□ -0.05
VRK3-201ENST00000316763 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.72□□□□□ -0.05
VRK3-201ENST00000316763 E5RJQ4 531 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 SPAG7O75391 227 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 CAPN15O75808 1086 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 ASMTLO95671 621 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 POMCP01189 267 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 PFKMP08237 780 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 RGS19P49795 217 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 GPX6P59796 221 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 IKBKEQ14164 716 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 DPYSL3Q14195 570 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 NOMO1Q15155 1222 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 TAF5Q15542 800 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 GOLGA7BQ2TAP0 167 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 FAM133BQ5BKY9 247 aaKnown RBP14.72□□□□□ -0.05
VRK3-201ENST00000316763 FNBP1LQ5T0N5 605 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 ANKRD22Q5VYY1 191 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 CYB5D1Q6P9G0 228 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 C3orf62Q6ZUJ4 267 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 FAM183BPQ6ZVS7 135 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 PARP9Q8IXQ6 854 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 CCDC63Q8NA47 563 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 APPL2Q8NEU8 664 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 LBHD1Q9BQE6 289 aaPredicted RBP14.72□□□□□ -0.05
VRK3-201ENST00000316763 C10orf88Q9H8K7 445 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.72□□□□□ -0.05
VRK3-201ENST00000316763 ABCF3Q9NUQ8 709 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 TMEM161AQ9NX61 479 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 CACNG4Q9UBN1 327 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 XPO7Q9UIA9 1087 aaKnown RBP14.72□□□□□ -0.05
VRK3-201ENST00000316763 RABGEF1Q9UJ41 708 aa14.72□□□□□ -0.05
VRK3-201ENST00000316763 TTC3P53804 2025 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.71□□□□□ -0.05
VRK3-201ENST00000316763 H7C0C1 242 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 DPYSL4O14531 572 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 HUS1O60921 280 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 FGFR1P11362 822 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 CA4P22748 312 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 ATP5OP48047 213 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 WDR4P57081 412 aaKnown RBP14.71□□□□□ -0.05
VRK3-201ENST00000316763 BASP1P80723 227 aaKnown RBP14.71□□□□□ -0.05
VRK3-201ENST00000316763 TUSC3Q13454 348 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 SNCBQ16143 134 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 BBS9Q3SYG4 887 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 CLLU1OSQ5K130 101 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 HHATQ5VTY9 493 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 RNF43Q68DV7 783 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 GLB1LQ6UWU2 654 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 CRYBG2Q8N1P7 616 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 C3orf58Q8NDZ4 430 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 FBXO36Q8NEA4 188 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 DENND1AQ8TEH3 1009 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 PEBP4Q96S96 227 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 ACSS3Q9H6R3 686 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 HESX1Q9UBX0 185 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 PRKAG3Q9UGI9 489 aa14.71□□□□□ -0.05
VRK3-201ENST00000316763 CFAP69A5D8W1 941 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 CASTOR2A6NHX0 329 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 UBOX5O94941 541 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 ZWINTO95229 277 aa14.7□□□□□ -0.06
VRK3-201ENST00000316763 IBSPP21815 317 aaPredicted RBP14.7□□□□□ -0.06
VRK3-201ENST00000316763 WARSP23381 471 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms