RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 AP3B1O00203 1094 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 KPNA6O60684 536 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 PIGRP01833 764 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 S100BP04271 92 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ASPAP45381 313 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 HSP90AA5PQ58FG0 334 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 FAM136AQ96C01 138 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ZDHHC18Q9NUE0 388 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 FAM105AQ9NUU6 356 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 SDR42E2A6NKP2 422 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 MYL2P10916 166 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 RPA3P35244 121 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ATXN3P54252 364 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ANKRD22Q5VYY1 191 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 C9orf57Q5W0N0 161 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 CYB5D1Q6P9G0 228 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.38□□□□□ -1.396e-7■■■■■ 48.8
PRKDC-201ENST00000314191 CHD2O14647 1828 aaKnown RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 SH3BP5O60239 455 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ART3Q13508 389 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 SLC4A11Q8NBS3 891 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 FBXO32Q969P5 355 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 APBA2Q99767 749 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 GRHL1Q9NZI5 618 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 RUVBL2Q9Y230 463 aaKnown RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 GOLGA8TH3BQL2 631 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 VAPBO95292 243 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 MPP3Q13368 585 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 N4BP2L2Q92802 583 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 PRDM12Q9H4Q4 367 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 POPDC2Q9HBU9 364 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 STOML1Q9UBI4 398 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 TULP2O00295 520 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ELNP15502 786 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 RABGGTBP53611 331 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 MAPRE1Q15691 268 aaKnown RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ANKRD20A2Q5SQ80 823 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ANKRD20A1Q5TYW2 823 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 DEFB128Q7Z7B8 93 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 MTDHQ86UE4 582 aaKnown RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 CD248Q9HCU0 757 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 SMIM35A0A1B0GVV1 85 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 GLRA3O75311 464 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 MRPS5P82675 430 aaKnown RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 MRPS6P82932 125 aaKnown RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ZDHHC24Q6UX98 284 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ATP6V0D2Q8N8Y2 350 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 MUC3BQ9H195 1237 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 CDKN2BP42772 138 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 SPRYD7Q5W111 196 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 CDC26Q8NHZ8 85 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 NPLOC4Q8TAT6 608 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ZNF75CPQ92670 426 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ZBED3Q96IU2 234 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 THTPAQ9BU02 230 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 C12orf65Q9H3J6 166 aaKnown RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 TRPC7Q9HCX4 862 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 MTO1Q9Y2Z2 717 aaKnown RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 CICQ96RK0 1608 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 QPCTQ16769 361 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 FAM171A1Q5VUB5 890 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 STRA8Q7Z7C7 330 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 AGGF1Q8N302 714 aaeCLIP6.38□□□□□ -1.391e-6■■■■□ 21.7
PRKDC-201ENST00000314191 SH3TC2Q8TF17 1288 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 CKAP2Q8WWK9 683 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 LMO2P25791 158 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 INHBEP58166 350 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 MAP3K10Q02779 954 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 CA9Q16790 459 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 GRAMD1BQ3KR37 738 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 C1orf146Q5VVC0 180 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 RGS9BPQ6ZS82 235 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 CPT1BQ92523 772 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 KAT2BQ92831 832 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 LRGUKQ96M69 825 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 SRPK1Q96SB4 655 aaKnown RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 PCDHB7Q9Y5E2 793 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 MYO18AQ92614 2054 aaKnown RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 GOLGA8QA0A0J9YX86 632 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 GOLGA8OA6NCC3 632 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 GOLGA8NF8WBI6 632 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 PMM2O15305 246 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 MTA2O94776 668 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 NRLP54845 237 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 PDAP1Q13442 181 aaKnown RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 UGP2Q16851 508 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 ILDR2Q71H61 639 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 ZFP42Q96MM3 310 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 DMAP1Q9NPF5 467 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 DNAJC16Q9Y2G8 782 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 DRD4P21917 467 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 RBBP5Q15291 538 aaKnown RBP6.37□□□□□ -1.39
PRKDC-201ENST00000314191 SLC39A12Q504Y0 691 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 NDFIP2Q9NV92 336 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 PADI3Q9ULW8 664 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 NR2E3Q9Y5X4 410 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 SLC30A1Q9Y6M5 507 aa6.37□□□□□ -1.39
PRKDC-201ENST00000314191 LTN1O94822 1766 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms