RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 RASSF2P50749 326 aa15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 TPSAB1Q15661 275 aa15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 C9orf57Q5W0N0 161 aa15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 UNC93AQ86WB7 457 aa15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 ZDHHC17Q8IUH5 632 aa15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 GPRC5AQ8NFJ5 357 aa15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 BEST2Q8NFU1 509 aa15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 KCNV2Q8TDN2 545 aa15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 KBTBD7Q8WVZ9 684 aa15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 CSPG4P5Q96PW8 444 aa15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 EBNA1BP2Q99848 306 aaKnown RBP15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 MECRQ9BV79 373 aa15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 RNPEPL1Q9HAU8 725 aa15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 FBXO6Q9NRD1 293 aaPredicted RBP15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 MKS1Q9NXB0 559 aa15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 MTO1Q9Y2Z2 717 aaKnown RBP15.76■□□□□ 0.11
SPIRE1-201ENST00000309836 HMX2A2RU54 273 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 MMP3P08254 477 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 NEFHP12036 1026 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 LCP1P13796 627 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 SMPD1P17405 629 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 GNAZP19086 355 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 SERPINB3P29508 390 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 GRIA1P42261 906 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 RPL34P49207 117 aaKnown RBP15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 CCNG1P51959 295 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 BST2Q10589 180 aaKnown RBP15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 WASHC2DQ5SRD0 308 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 SLC27A1Q6PCB7 646 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 KCNT2Q6UVM3 1135 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 ALKAL1Q6UXT8 129 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 C4orf22Q6V702 233 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 VPS52Q8N1B4 723 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 C7orf31Q8N865 590 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 TTC8Q8TAM2 541 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 SETD4Q9NVD3 440 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 RNF181Q9P0P0 153 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 NR2E3Q9Y5X4 410 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 USP3Q9Y6I4 520 aa15.75■□□□□ 0.11
SPIRE1-201ENST00000309836 A6NJR5 290 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 A8MXQ7 604 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 HNRNPCL1O60812 293 aaKnown RBP15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 GPR32O75388 356 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 PDGFRBP09619 1106 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 VAV1P15498 845 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 DESP17661 470 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 SCNN1AP37088 669 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 SNX16P57768 344 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 SNAPC2Q13487 334 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 NCBP2-AS2Q69YL0 99 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 RFWD3Q6PCD5 774 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 CATSPER4Q7RTX7 472 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 ANKRD52Q8NB46 1076 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 PPP1R13LQ8WUF5 828 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 CADM1Q9BY67 442 aaKnown RBP15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 FAM49AQ9H0Q0 323 aaPredicted RBP15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 NXF3Q9H4D5 531 aaKnown RBP15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 DENND2DQ9H6A0 471 aaPredicted RBP15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 SLC5A4Q9NY91 659 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 GTF2IRD1Q9UHL9 959 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 PCDHA11Q9Y5I1 949 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 MAD1L1Q9Y6D9 718 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 PDCD11Q14690 1871 aaKnown RBP15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 SPTLC1O15269 473 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 DGKIO75912 1065 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 RECQL4O94761 1208 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 ZFXP17010 805 aaPredicted RBP15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 AMPD1P23109 780 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 LMO2P25791 158 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 CLNS1AP54105 237 aaKnown RBP15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 BCAT1P54687 386 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 SEMA5AQ13591 1074 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 NBPF20Q3BBV1 942 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 TEX44Q53QW1 395 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 TTC7BQ86TV6 843 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 PYROXD2Q8N2H3 581 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 ARMC2Q8NEN0 867 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 GSDMBQ8TAX9 411 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 OXNAD1Q96HP4 312 aaPredicted RBP15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 NSL1Q96IY1 281 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 RSRC1Q96IZ7 334 aaKnown RBP15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 IQCGQ9H095 443 aaKnown RBP15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 DTLQ9NZJ0 730 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 GINS2Q9Y248 185 aa15.74■□□□□ 0.11
SPIRE1-201ENST00000309836 CCDC195A0A1B0GUA6 201 aa15.73■□□□□ 0.11
SPIRE1-201ENST00000309836 FAM237BA0A1B0GVD1 139 aa15.73■□□□□ 0.11
SPIRE1-201ENST00000309836 FCHO1O14526 889 aa15.73■□□□□ 0.11
SPIRE1-201ENST00000309836 MYL2P10916 166 aa15.73■□□□□ 0.11
SPIRE1-201ENST00000309836 CALB2P22676 271 aa15.73■□□□□ 0.11
SPIRE1-201ENST00000309836 NR2C2P49116 596 aa15.73■□□□□ 0.11
SPIRE1-201ENST00000309836 CCNA1P78396 465 aa15.73■□□□□ 0.11
SPIRE1-201ENST00000309836 BST1Q10588 318 aa15.73■□□□□ 0.11
SPIRE1-201ENST00000309836 KRT72Q14CN4 511 aa15.73■□□□□ 0.11
SPIRE1-201ENST00000309836 HSF5Q4G112 596 aaPredicted RBP15.73■□□□□ 0.11
SPIRE1-201ENST00000309836 ANKRD20A2Q5SQ80 823 aa15.73■□□□□ 0.11
SPIRE1-201ENST00000309836 ZNF618Q5T7W0 954 aa15.73■□□□□ 0.11
SPIRE1-201ENST00000309836 ANKRD20A1Q5TYW2 823 aa15.73■□□□□ 0.11
SPIRE1-201ENST00000309836 ANKRD20A3Q5VUR7 823 aa15.73■□□□□ 0.11
SPIRE1-201ENST00000309836 DENND5BQ6ZUT9 1274 aa15.73■□□□□ 0.11
SPIRE1-201ENST00000309836 ARCQ7LC44 396 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms