RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 FAR2Q96K12 515 aa19.11■□□□□ 0.65
UBXN2A-201ENST00000309033 PGLYRP2Q96PD5 576 aa19.11■□□□□ 0.65
UBXN2A-201ENST00000309033 C6orf203Q9P0P8 240 aaPredicted RBP19.11■□□□□ 0.65
UBXN2A-201ENST00000309033 SLC24A2Q9UI40 661 aa19.11■□□□□ 0.65
UBXN2A-201ENST00000309033 CCDC130P13994 396 aa19.11■□□□□ 0.65
UBXN2A-201ENST00000309033 SLC16A1P53985 500 aa19.11■□□□□ 0.65
UBXN2A-201ENST00000309033 ERVK-9P63128 1117 aa19.11■□□□□ 0.65
UBXN2A-201ENST00000309033 REPS2Q8NFH8 660 aa19.11■□□□□ 0.65
UBXN2A-201ENST00000309033 PHF21AQ96BD5 680 aa19.11■□□□□ 0.65
UBXN2A-201ENST00000309033 WNT10BO00744 389 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 TSPAN3O60637 253 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 MGAT1P26572 445 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 N4BP2L1Q5TBK1 243 aaPredicted RBP19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 MFSD7Q6UXD7 560 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 C3orf20Q8ND61 904 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 LPCAT1Q8NF37 534 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 PHF21BQ96EK2 531 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 GBA2Q9HCG7 927 aaPredicted RBP19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 DRG1Q9Y295 367 aaKnown RBP19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 HNRNPRO43390 633 aaKnown RBP19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 SMNDC1O75940 238 aaKnown RBP eCLIP19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 CRTAMO95727 393 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 SSTR1P30872 391 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 APOBEC3HQ6NTF7 200 aaKnown RBP19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 FBXL16Q8N461 479 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 CATSPER2Q96P56 530 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 APPL1Q9UKG1 709 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 FRMPD4Q14CM0 1322 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 ZCCHC18P0CG32 403 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 PCNAP12004 261 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 TBX2Q13207 712 aaPredicted RBP19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 TRIM48Q8IWZ4 208 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 TMCO5AQ8N6Q1 288 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 SEMA4DQ92854 862 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 ADGRB1O14514 1584 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 ALDH6A1Q02252 535 aaKnown RBP19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 P2RX7Q99572 595 aaKnown RBP19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 CACNA2D2Q9NY47 1150 aa19.1■□□□□ 0.65
UBXN2A-201ENST00000309033 TM9SF1O15321 606 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 SLC30A9Q6PML9 568 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 ILDR2Q71H61 639 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 TLR10Q9BXR5 811 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 KIDINS220Q9ULH0 1771 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 A0A0U1RQJ8 604 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 MEI4A8MW99 385 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 ADM5C9JUS6 153 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 PECAM1P16284 738 aaPredicted RBP19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 CALB2P22676 271 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 MGAT5Q09328 741 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 TMC3Q7Z5M5 1100 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 DNPEPQ9ULA0 475 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 COL3A1P02461 1466 aaPredicted RBP19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 MRPL28Q13084 256 aaKnown RBP19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 BBS7Q8IWZ6 715 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 MICU2Q8IYU8 434 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 PPP1R13LQ8WUF5 828 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 USE1Q9NZ43 259 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 PCDHA3Q9Y5H8 950 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 DNALI1O14645 258 aaPredicted RBP19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 GUCA1CO95843 209 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 CNTFP26441 200 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 IFI35P80217 286 aaPredicted RBP19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 CCDC142Q17RM4 750 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 ZNF280DQ6N043 979 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 ITGALP20701 1170 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 TMEM132BQ14DG7 1078 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 OVOS1Q6IE37 1185 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 FAM83AQ86UY5 434 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 NINJ2Q9NZG7 142 aa19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 DDX20Q9UHI6 824 aaKnown RBP19.09■□□□□ 0.65
UBXN2A-201ENST00000309033 GOLGA8TH3BQL2 631 aa19.08■□□□□ 0.65
UBXN2A-201ENST00000309033 BAIAP3O94812 1187 aa19.08■□□□□ 0.65
UBXN2A-201ENST00000309033 URODP06132 367 aa19.08■□□□□ 0.65
UBXN2A-201ENST00000309033 TP53BP2Q13625 1128 aa19.08■□□□□ 0.65
UBXN2A-201ENST00000309033 UBXN6Q9BZV1 441 aa19.08■□□□□ 0.65
UBXN2A-201ENST00000309033 STARD7Q9NQZ5 370 aa19.08■□□□□ 0.65
UBXN2A-201ENST00000309033 SLC1A6P48664 564 aa19.08■□□□□ 0.65
UBXN2A-201ENST00000309033 MRPS35P82673 323 aaKnown RBP19.08■□□□□ 0.65
UBXN2A-201ENST00000309033 RUNX1T1Q06455 604 aa19.08■□□□□ 0.65
UBXN2A-201ENST00000309033 ATP6AP1LQ52LC2 224 aa19.08■□□□□ 0.65
UBXN2A-201ENST00000309033 SLC2A14Q8TDB8 520 aa19.08■□□□□ 0.65
UBXN2A-201ENST00000309033 YME1L1Q96TA2 773 aa19.08■□□□□ 0.65
UBXN2A-201ENST00000309033 SH3GL3Q99963 347 aa19.08■□□□□ 0.65
UBXN2A-201ENST00000309033 NAT9Q9BTE0 207 aa19.08■□□□□ 0.65
UBXN2A-201ENST00000309033 TBC1D23Q9NUY8 699 aa19.08■□□□□ 0.65
UBXN2A-201ENST00000309033 TGFB2P61812 414 aa19.08■□□□□ 0.64
UBXN2A-201ENST00000309033 TCP10LQ8TDR4 215 aa19.08■□□□□ 0.64
UBXN2A-201ENST00000309033 ACOX2Q99424 681 aa19.08■□□□□ 0.64
UBXN2A-201ENST00000309033 ATXN3LQ9H3M9 355 aa19.08■□□□□ 0.64
UBXN2A-201ENST00000309033 CXorf56Q9H5V9 222 aa19.08■□□□□ 0.64
UBXN2A-201ENST00000309033 LRRC4BQ9NT99 713 aa19.08■□□□□ 0.64
UBXN2A-201ENST00000309033 CASP5P51878 434 aa19.08■□□□□ 0.64
UBXN2A-201ENST00000309033 ACADSP16219 412 aa19.08■□□□□ 0.64
UBXN2A-201ENST00000309033 ATP6V1B2P21281 511 aa19.08■□□□□ 0.64
UBXN2A-201ENST00000309033 CCR1P32246 355 aa19.08■□□□□ 0.64
UBXN2A-201ENST00000309033 TBL3Q12788 808 aaKnown RBP19.08■□□□□ 0.64
UBXN2A-201ENST00000309033 HTR3CQ8WXA8 447 aa19.08■□□□□ 0.64
UBXN2A-201ENST00000309033 RMND5AQ9H871 391 aa19.08■□□□□ 0.64
UBXN2A-201ENST00000309033 DCDC2CA8MYV0 355 aa19.07■□□□□ 0.64
UBXN2A-201ENST00000309033 RBP1P09455 135 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms