RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 CDT1Q9H211 546 aa17.18■□□□□ 0.34
SSH3-201ENST00000308127 NDE1Q9NXR1 346 aa17.18■□□□□ 0.34
SSH3-201ENST00000308127 TSPAN16Q9UKR8 245 aa17.18■□□□□ 0.34
SSH3-201ENST00000308127 PLA2G4CQ9UP65 541 aa17.18■□□□□ 0.34
SSH3-201ENST00000308127 PSAT1Q9Y617 370 aa17.18■□□□□ 0.34
SSH3-201ENST00000308127 SYNJ2BP-COX16A0A087WUM0 186 aa17.17■□□□□ 0.34
SSH3-201ENST00000308127 MED7O43513 233 aa17.17■□□□□ 0.34
SSH3-201ENST00000308127 ENPEPQ07075 957 aa17.17■□□□□ 0.34
SSH3-201ENST00000308127 SLC10A2Q12908 348 aaPredicted RBP17.17■□□□□ 0.34
SSH3-201ENST00000308127 NCAPG2Q86XI2 1143 aa17.17■□□□□ 0.34
SSH3-201ENST00000308127 SNRNP25Q9BV90 132 aaKnown RBP17.17■□□□□ 0.34
SSH3-201ENST00000308127 OXCT2Q9BYC2 517 aaPredicted RBP17.17■□□□□ 0.34
SSH3-201ENST00000308127 NIFKQ9BYG3 293 aaKnown RBP17.17■□□□□ 0.34
SSH3-201ENST00000308127 RPF1Q9H9Y2 349 aaKnown RBP17.17■□□□□ 0.34
SSH3-201ENST00000308127 KCNK4Q9NYG8 393 aa17.17■□□□□ 0.34
SSH3-201ENST00000308127 COX16Q9P0S2 106 aa17.17■□□□□ 0.34
SSH3-201ENST00000308127 BTBD7Q9P203 1132 aa17.17■□□□□ 0.34
SSH3-201ENST00000308127 TAGLN3Q9UI15 199 aa17.17■□□□□ 0.34
SSH3-201ENST00000308127 ASB3Q9Y575 518 aa17.17■□□□□ 0.34
SSH3-201ENST00000308127 STIP1P31948 543 aaKnown RBP17.17■□□□□ 0.34
SSH3-201ENST00000308127 ZNF143P52747 638 aaPredicted RBP17.17■□□□□ 0.34
SSH3-201ENST00000308127 ATXN3P54252 364 aaPredicted RBP17.17■□□□□ 0.34
SSH3-201ENST00000308127 LBRQ14739 615 aaKnown RBP17.17■□□□□ 0.34
SSH3-201ENST00000308127 EML3Q32P44 896 aa17.17■□□□□ 0.34
SSH3-201ENST00000308127 CCDC14Q49A88 953 aa17.17■□□□□ 0.34
SSH3-201ENST00000308127 FGD4Q96M96 766 aa17.17■□□□□ 0.34
SSH3-201ENST00000308127 WWP1Q9H0M0 922 aa17.17■□□□□ 0.34
SSH3-201ENST00000308127 XAB2Q9HCS7 855 aaKnown RBP17.17■□□□□ 0.34
SSH3-201ENST00000308127 C2CD4BA6NLJ0 364 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 APOL1O14791 398 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 RNASEH1O60930 286 aaKnown RBP17.16■□□□□ 0.34
SSH3-201ENST00000308127 FESP07332 822 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 CDC16Q13042 620 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 SPDYAQ5MJ70 313 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 GJC2Q5T442 439 aaPredicted RBP17.16■□□□□ 0.34
SSH3-201ENST00000308127 ANGEL2Q5VTE6 544 aaKnown RBP17.16■□□□□ 0.34
SSH3-201ENST00000308127 ATG16L1Q676U5 607 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 MPZL3Q6UWV2 235 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 ZNF534Q76KX8 674 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.16■□□□□ 0.34
SSH3-201ENST00000308127 MCRS1Q96EZ8 462 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 TUBB6Q9BUF5 446 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 CCDC106Q9BWC9 280 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 KLC2Q9H0B6 622 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 DHX35Q9H5Z1 703 aaKnown RBP17.16■□□□□ 0.34
SSH3-201ENST00000308127 PCDH18Q9HCL0 1135 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 TMPRSS4Q9NRS4 437 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 PAK5Q9P286 719 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 EFR3BQ9Y2G0 817 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 CHADO15335 359 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 TM7SF2O76062 418 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 BPGMP07738 259 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 LYNP07948 512 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 NCF2P19878 526 aaPredicted RBP17.16■□□□□ 0.34
SSH3-201ENST00000308127 ARRB2P32121 409 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 MSX2P35548 267 aaPredicted RBP17.16■□□□□ 0.34
SSH3-201ENST00000308127 N4BP2L1Q5TBK1 243 aaPredicted RBP17.16■□□□□ 0.34
SSH3-201ENST00000308127 AP1ARQ63HQ0 302 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 DPY19L2Q6NUT2 758 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 PMF1Q6P1K2 205 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 RNF111Q6ZNA4 994 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 PYROXD2Q8N2H3 581 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 GATA6Q92908 595 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 PGBD4Q96DM1 585 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 CLMNQ96JQ2 1002 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 SH3GL3Q99963 347 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 SIRPGQ9P1W8 387 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 EVPLQ92817 2033 aa17.16■□□□□ 0.34
SSH3-201ENST00000308127 TXNDC9O14530 226 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 ADCY6O43306 1168 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 PROCP04070 461 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 EN1Q05925 392 aaPredicted RBP17.15■□□□□ 0.34
SSH3-201ENST00000308127 TREML2Q5T2D2 321 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 FNIP1Q8TF40 1166 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 GBP5Q96PP8 586 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 CNPY3Q9BT09 278 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 TRIM4Q9C037 500 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 LHX5Q9H2C1 402 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 RNPEPQ9H4A4 650 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 SEPT10Q9P0V9 454 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 ZNF212Q9UDV6 495 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 NOP56O00567 594 aaKnown RBP17.15■□□□□ 0.34
SSH3-201ENST00000308127 AHCYL1O43865 530 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 CILPO75339 1184 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 ACOT1Q86TX2 421 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 TNS4Q8IZW8 715 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 ARHGAP24Q8N264 748 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 C7orf31Q8N865 590 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 MTMR14Q8NCE2 650 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 NDRG1Q92597 394 aaKnown RBP17.15■□□□□ 0.34
SSH3-201ENST00000308127 ECSITQ9BQ95 431 aa17.15■□□□□ 0.34
SSH3-201ENST00000308127 RPL26L1Q9UNX3 145 aaKnown RBP17.15■□□□□ 0.34
SSH3-201ENST00000308127 A0A088AWK7 358 aa17.14■□□□□ 0.34
SSH3-201ENST00000308127 TPP1O14773 563 aa17.14■□□□□ 0.34
SSH3-201ENST00000308127 KRT38O76015 456 aa17.14■□□□□ 0.34
SSH3-201ENST00000308127 STAG3L1P0CL83 205 aa17.14■□□□□ 0.34
SSH3-201ENST00000308127 GMPSP49915 693 aaPredicted RBP17.14■□□□□ 0.34
SSH3-201ENST00000308127 TNFAIP1Q13829 316 aa17.14■□□□□ 0.34
SSH3-201ENST00000308127 TFDP2Q14188 446 aa17.14■□□□□ 0.34
SSH3-201ENST00000308127 GOLGA7BQ2TAP0 167 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms