RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 ADRA1BP35368 520 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 LMNB2Q03252 620 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 SNX1Q13596 522 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 CA9Q16790 459 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 EFHC2Q5JST6 749 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 CCNI2Q6ZMN8 369 aaPredicted RBP18.22■□□□□ 0.51
KRT28-201ENST00000306658 STKLD1Q8NE28 680 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 DQX1Q8TE96 717 aaKnown RBP18.22■□□□□ 0.51
KRT28-201ENST00000306658 ATG4AQ8WYN0 398 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 RNF157Q96PX1 679 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 ZBP1Q9H171 429 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 PLEKHA4Q9H4M7 779 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 WDCPQ9H6R7 721 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 CYP4F11Q9HBI6 524 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 WDR6Q9NNW5 1121 aaKnown RBP18.22■□□□□ 0.51
KRT28-201ENST00000306658 GDF3Q9NR23 364 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 CLIC5Q9NZA1 410 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 MYO16Q9Y6X6 1858 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 SLC38A8A6NNN8 435 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 ECEL1O95672 775 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 ATF6P18850 670 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 BMPR1AP36894 532 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 ARL4AP40617 200 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 PTGIRP43119 386 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 CXCR3P49682 368 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 DYNLT1P63172 113 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 MMRN1Q13201 1228 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 MAP9Q49MG5 647 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 ANKRD20A8PQ5CZ79 823 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 RASIP1Q5U651 963 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 DRICH1Q6PGQ1 229 aaPredicted RBP18.22■□□□□ 0.51
KRT28-201ENST00000306658 TAC4Q86UU9 113 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 JAMLQ86YT9 394 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 GIPC2Q8TF65 315 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 HNRNPLLQ8WVV9 542 aaKnown RBP18.22■□□□□ 0.51
KRT28-201ENST00000306658 AUTS2Q8WXX7 1259 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 SLCO2A1Q92959 643 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 HINFPQ9BQA5 517 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 SMOC2Q9H3U7 446 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 NMUR1Q9HB89 426 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 RXFP1Q9HBX9 757 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 GMIPQ9P107 970 aa18.22■□□□□ 0.51
KRT28-201ENST00000306658 RCOR3Q9P2K3 495 aaPredicted RBP18.22■□□□□ 0.51
KRT28-201ENST00000306658 COL4A4P53420 1690 aaPredicted RBP18.21■□□□□ 0.51
KRT28-201ENST00000306658 PLXNA3P51805 1871 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 APOC4-APOC2K7ER74 178 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 LILRB3O75022 631 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 SEC24AO95486 1093 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 APOC2P02655 101 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 IL4RP24394 825 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 TNFRSF8P28908 595 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 ALDH1A3P47895 512 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 KCNJ1P48048 391 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 CLCN6P51797 869 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 SCAPQ12770 1279 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 TAF10Q12962 218 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 BYSLQ13895 437 aaKnown RBP18.21■□□□□ 0.51
KRT28-201ENST00000306658 TMCO3Q6UWJ1 677 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 SYDE1Q6ZW31 735 aaPredicted RBP18.21■□□□□ 0.51
KRT28-201ENST00000306658 TMC7Q7Z402 723 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 RNF34Q969K3 372 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 TTLL2Q9BWV7 592 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 PRDM16Q9HAZ2 1276 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 ARFGAP3Q9NP61 516 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 OLA1Q9NTK5 396 aaKnown RBP18.21■□□□□ 0.51
KRT28-201ENST00000306658 LZTS1Q9Y250 596 aa18.21■□□□□ 0.51
KRT28-201ENST00000306658 ZNF638Q14966 1978 aaKnown RBP18.21■□□□□ 0.51
KRT28-201ENST00000306658 GREB1Q4ZG55 1949 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 LCHNA4D1U4 455 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 TEX28O15482 410 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 LIASO43766 372 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 GAS8O95995 478 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 IGLV3-25P01717 112 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 CSH1P0DML2 217 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 CSH2P0DML3 217 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 CA8P35219 290 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 CTNNB1P35222 781 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 MTMR3Q13615 1198 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 FAF2Q96CS3 445 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 CCDC114Q96M63 670 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 SERPINB11Q96P15 392 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 KCTD15Q96SI1 283 aaPredicted RBP18.2■□□□□ 0.5
KRT28-201ENST00000306658 ERP44Q9BS26 406 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 MTMR10Q9NXD2 777 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 DRG1Q9Y295 367 aaKnown RBP18.2■□□□□ 0.5
KRT28-201ENST00000306658 NR2E3Q9Y5X4 410 aa18.2■□□□□ 0.5
KRT28-201ENST00000306658 PRRG1O14668 218 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 APOL1O14791 398 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 IRAK2O43187 625 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 CXCL14O95715 111 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 ZFXP17010 805 aaPredicted RBP18.19■□□□□ 0.5
KRT28-201ENST00000306658 PGFP49763 221 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 EIF4EBP2Q13542 120 aaPredicted RBP18.19■□□□□ 0.5
KRT28-201ENST00000306658 CUL1Q13616 776 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 VEPH1Q14D04 833 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 PPP1R7Q15435 360 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 BRMS1LQ5PSV4 323 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 MSANTD2Q6P1R3 559 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 TCEAL8Q8IYN2 117 aa18.19■□□□□ 0.5
KRT28-201ENST00000306658 EIF1ADQ8N9N8 165 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms