RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 ZBED1O96006 694 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 INHBAP08476 426 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 TROVE2P10155 538 aaKnown RBP eCLIP14.73□□□□□ -0.05
RAB40A-201ENST00000304236 ZFXP17010 805 aaPredicted RBP14.73□□□□□ -0.05
RAB40A-201ENST00000304236 FAAP100Q0VG06 881 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 PCBP1Q15365 356 aaKnown RBP eCLIP14.73□□□□□ -0.05
RAB40A-201ENST00000304236 GRIK4Q16099 956 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 CDO1Q16878 200 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 PPP1R26Q5T8A7 1209 aaPredicted RBP14.73□□□□□ -0.05
RAB40A-201ENST00000304236 ARHGAP17Q68EM7 881 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 SCYL2Q6P3W7 929 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 C1orf228Q6PIY5 440 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 CEP57Q86XR8 500 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 LRRC52Q8N7C0 313 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 TCP10LQ8TDR4 215 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 FAM172AQ8WUF8 416 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 C10orf82Q8WW14 230 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 APBB2Q92870 758 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 MYLK2Q9H1R3 596 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 PCDH18Q9HCL0 1135 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 SLCO1B3Q9NPD5 702 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 CYLDQ9NQC7 956 aa14.73□□□□□ -0.05
RAB40A-201ENST00000304236 C2CD2LO14523 706 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 KCNN4O15554 427 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 FAM155BO75949 473 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 IL4RP24394 825 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 ITGB8P26012 769 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 SCNN1AP37088 669 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 RGS7P49802 495 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 RASSF2P50749 326 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 YWHAGP61981 247 aaKnown RBP eCLIP14.72□□□□□ -0.05
RAB40A-201ENST00000304236 SLC18A2Q05940 514 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 PTK7Q13308 1070 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 PARP6Q2NL67 630 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 SLC45A4Q5BKX6 768 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 LGSNQ5TDP6 509 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 ZNF697Q5TEC3 545 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 PMF1Q6P1K2 205 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 OTOAQ7RTW8 1153 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 CDKL3Q8IVW4 592 aaPredicted RBP14.72□□□□□ -0.05
RAB40A-201ENST00000304236 TAB3Q8N5C8 712 aaPredicted RBP14.72□□□□□ -0.05
RAB40A-201ENST00000304236 MCUQ8NE86 351 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 BEST2Q8NFU1 509 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 SLC35F5Q8WV83 523 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 INPP5DQ92835 1189 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 LRRC39Q96DD0 335 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 NGRNQ9NPE2 291 aaKnown RBP14.72□□□□□ -0.05
RAB40A-201ENST00000304236 RAB6BQ9NRW1 208 aa14.72□□□□□ -0.05
RAB40A-201ENST00000304236 TCRBV9S1A1TA0A576 114 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 RRN3P2A6NIE6 340 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 HNRNPCL1O60812 293 aaKnown RBP14.71□□□□□ -0.05
RAB40A-201ENST00000304236 ZNF286BP0CG31 522 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 HOXD8P13378 290 aaPredicted RBP14.71□□□□□ -0.05
RAB40A-201ENST00000304236 PTPN9P43378 593 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 NKX3-2P78367 333 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 ATP11AP98196 1134 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 FPGSQ05932 587 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 ARCQ7LC44 396 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 CHSY1Q86X52 802 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 AGGF1Q8N302 714 aaeCLIP14.71□□□□□ -0.05
RAB40A-201ENST00000304236 PQLC3Q8N755 202 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 C12orf29Q8N999 325 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 SPOCK2Q92563 424 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 ERP27Q96DN0 273 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 APOPT1Q96IL0 206 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 GCOM2Q9BZD3 368 aaPredicted RBP14.71□□□□□ -0.05
RAB40A-201ENST00000304236 LRMDAQ9H2I8 198 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 CHKBQ9Y259 395 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 SNX9Q9Y5X1 595 aa14.71□□□□□ -0.05
RAB40A-201ENST00000304236 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.71□□□□□ -0.06
RAB40A-201ENST00000304236 PIK3R2O00459 728 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 LPXNO60711 386 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 GRAP2O75791 330 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 WFS1O76024 890 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 NPTXRO95502 500 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 KRT16P08779 473 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 CCND1P24385 295 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 ADRA1DP25100 572 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 NR2C2P49116 596 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 CDK7P50613 346 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 SMAD3P84022 425 aaKnown RBP14.71□□□□□ -0.06
RAB40A-201ENST00000304236 TTC39BQ5VTQ0 682 aaPredicted RBP14.71□□□□□ -0.06
RAB40A-201ENST00000304236 IQSEC1Q6DN90 963 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 SLC27A1Q6PCB7 646 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 ACOT1Q86TX2 421 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 SLC26A11Q86WA9 606 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 TTC30AQ86WT1 665 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 IGDCC3Q8IVU1 814 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 PCDH19Q8TAB3 1148 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 PIWIL1Q96J94 861 aaKnown RBP14.71□□□□□ -0.06
RAB40A-201ENST00000304236 SNX27Q96L92 541 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 TMEM237Q96Q45 408 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 MRPL45Q9BRJ2 306 aaKnown RBP14.71□□□□□ -0.06
RAB40A-201ENST00000304236 TUBB6Q9BUF5 446 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 SNRNP25Q9BV90 132 aaKnown RBP14.71□□□□□ -0.06
RAB40A-201ENST00000304236 AP5M1Q9H0R1 490 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 YY1AP1Q9H869 796 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 MANSC1Q9H8J5 431 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 ETNK1Q9HBU6 452 aa14.71□□□□□ -0.06
RAB40A-201ENST00000304236 ETNK2Q9NVF9 386 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms