RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 GRIK1P39086 918 aa23.14■■□□□ 1.3
SMAD1-201ENST00000302085 NRLP54845 237 aa23.14■■□□□ 1.3
SMAD1-201ENST00000302085 IFFO1Q0D2I5 559 aa23.14■■□□□ 1.3
SMAD1-201ENST00000302085 SLC10A2Q12908 348 aaPredicted RBP23.14■■□□□ 1.3
SMAD1-201ENST00000302085 MRPL58Q14197 206 aaKnown RBP23.14■■□□□ 1.3
SMAD1-201ENST00000302085 DEFB128Q7Z7B8 93 aa23.14■■□□□ 1.3
SMAD1-201ENST00000302085 DCP1BQ8IZD4 617 aaKnown RBP23.14■■□□□ 1.3
SMAD1-201ENST00000302085 UHMK1Q8TAS1 419 aaKnown RBP23.14■■□□□ 1.3
SMAD1-201ENST00000302085 PGAP3Q96FM1 320 aaPredicted RBP23.14■■□□□ 1.3
SMAD1-201ENST00000302085 FOXP3Q9BZS1 431 aa23.14■■□□□ 1.3
SMAD1-201ENST00000302085 GOLGA6L10A6NI86 522 aa23.14■■□□□ 1.29
SMAD1-201ENST00000302085 TNFRSF10BO14763 440 aa23.14■■□□□ 1.29
SMAD1-201ENST00000302085 ADRA1BP35368 520 aa23.14■■□□□ 1.29
SMAD1-201ENST00000302085 MORF4L2Q15014 288 aa23.14■■□□□ 1.29
SMAD1-201ENST00000302085 FAM171A1Q5VUB5 890 aa23.14■■□□□ 1.29
SMAD1-201ENST00000302085 CEP57Q86XR8 500 aa23.14■■□□□ 1.29
SMAD1-201ENST00000302085 SLC9A7Q96T83 725 aa23.14■■□□□ 1.29
SMAD1-201ENST00000302085 ANLNQ9NQW6 1124 aa23.14■■□□□ 1.29
SMAD1-201ENST00000302085 ETNK2Q9NVF9 386 aa23.14■■□□□ 1.29
SMAD1-201ENST00000302085 TBKBP1A7MCY6 615 aa23.13■■□□□ 1.29
SMAD1-201ENST00000302085 HOXA2O43364 376 aa23.13■■□□□ 1.29
SMAD1-201ENST00000302085 MAP3K6O95382 1288 aa23.13■■□□□ 1.29
SMAD1-201ENST00000302085 ZFXP17010 805 aaPredicted RBP23.13■■□□□ 1.29
SMAD1-201ENST00000302085 GBE1Q04446 702 aa23.13■■□□□ 1.29
SMAD1-201ENST00000302085 RELL1Q8IUW5 271 aa23.13■■□□□ 1.29
SMAD1-201ENST00000302085 DIS3LQ8TF46 1054 aaKnown RBP23.13■■□□□ 1.29
SMAD1-201ENST00000302085 B3GALT6Q96L58 329 aa23.13■■□□□ 1.29
SMAD1-201ENST00000302085 CENPHQ9H3R5 247 aa23.13■■□□□ 1.29
SMAD1-201ENST00000302085 RRN3Q9NYV6 651 aa23.13■■□□□ 1.29
SMAD1-201ENST00000302085 RCOR3Q9P2K3 495 aaPredicted RBP23.13■■□□□ 1.29
SMAD1-201ENST00000302085 FARP1Q9Y4F1 1045 aaPredicted RBP23.13■■□□□ 1.29
SMAD1-201ENST00000302085 HMGB1P1B2RPK0 211 aaPredicted RBP23.12■■□□□ 1.29
SMAD1-201ENST00000302085 TTC4O95801 387 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 FGFR3P22607 806 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 ARL4AP40617 200 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 CTCFP49711 727 aaPredicted RBP23.12■■□□□ 1.29
SMAD1-201ENST00000302085 KYNUQ16719 465 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 KRT71Q3SY84 523 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 CPT1BQ92523 772 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 PRCCQ92733 491 aaPredicted RBP23.12■■□□□ 1.29
SMAD1-201ENST00000302085 DDIT4Q9NX09 232 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 ABI2Q9NYB9 513 aaPredicted RBP23.12■■□□□ 1.29
SMAD1-201ENST00000302085 FBXW11Q9UKB1 542 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 MFHAS1Q9Y4C4 1052 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 VWA8A3KMH1 1905 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 BCLAF3A2AJT9 711 aaKnown RBP23.12■■□□□ 1.29
SMAD1-201ENST00000302085 I6L893 689 aaPredicted RBP23.12■■□□□ 1.29
SMAD1-201ENST00000302085 PARNO95453 639 aaKnown RBP23.12■■□□□ 1.29
SMAD1-201ENST00000302085 AMHP03971 560 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 GALTP07902 379 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 SLC5A3P53794 718 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 CTXN3Q4LDR2 81 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 NCBP2-AS2Q69YL0 99 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 LRRN4Q8WUT4 740 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 NTAN1Q96AB6 310 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 RBM15Q96T37 977 aaKnown RBP eCLIP23.12■■□□□ 1.29
SMAD1-201ENST00000302085 NINJ2Q9NZG7 142 aa23.12■■□□□ 1.29
SMAD1-201ENST00000302085 TANC1Q9C0D5 1861 aa23.11■■□□□ 1.29
SMAD1-201ENST00000302085 NT5C1B-RDH14C9J2C7 533 aa23.11■■□□□ 1.29
SMAD1-201ENST00000302085 RBL1P28749 1068 aa23.11■■□□□ 1.29
SMAD1-201ENST00000302085 EFHC2Q5JST6 749 aa23.11■■□□□ 1.29
SMAD1-201ENST00000302085 FAM182AQ5T1J6 154 aa23.11■■□□□ 1.29
SMAD1-201ENST00000302085 ANKRD22Q5VYY1 191 aa23.11■■□□□ 1.29
SMAD1-201ENST00000302085 PCGF5Q86SE9 256 aa23.11■■□□□ 1.29
SMAD1-201ENST00000302085 SCN4BQ8IWT1 228 aa23.11■■□□□ 1.29
SMAD1-201ENST00000302085 TAB3Q8N5C8 712 aaPredicted RBP23.11■■□□□ 1.29
SMAD1-201ENST00000302085 RNF139Q8WU17 664 aa23.11■■□□□ 1.29
SMAD1-201ENST00000302085 TMEM109Q9BVC6 243 aa23.11■■□□□ 1.29
SMAD1-201ENST00000302085 ARHGEF4Q9NR80 690 aa23.11■■□□□ 1.29
SMAD1-201ENST00000302085 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.11■■□□□ 1.29
SMAD1-201ENST00000302085 SHOC2Q9UQ13 582 aa23.11■■□□□ 1.29
SMAD1-201ENST00000302085 COL4A4P53420 1690 aaPredicted RBP23.11■■□□□ 1.29
SMAD1-201ENST00000302085 PATJQ8NI35 1801 aa23.11■■□□□ 1.29
SMAD1-201ENST00000302085 ACSL3O95573 720 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 F9P00740 461 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 PBX3P40426 434 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 PGFP49763 221 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 AGBL2Q5U5Z8 902 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 C1orf53Q5VUE5 145 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.1■■□□□ 1.29
SMAD1-201ENST00000302085 PPIL6Q8IXY8 311 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 VWCEQ96DN2 955 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 RTP4Q96DX8 246 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 TMEM175Q9BSA9 504 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 MRPL9Q9BYD2 267 aaKnown RBP23.1■■□□□ 1.29
SMAD1-201ENST00000302085 H3BRJ5 948 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 NDC80O14777 642 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 KCNN4O15554 427 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 NR2C2P49116 596 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 CXCR3P49682 368 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 AIF1P55008 147 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 SCAPQ12770 1279 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 XRCC4Q13426 336 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 NFE2Q16621 373 aaPredicted RBP23.1■■□□□ 1.29
SMAD1-201ENST00000302085 BEND5Q7L4P6 421 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 TAC4Q86UU9 113 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 NAT8LQ8N9F0 302 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 FUBP3Q96I24 572 aaKnown RBP eCLIP23.1■■□□□ 1.29
SMAD1-201ENST00000302085 PSD3Q9NYI0 1048 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 BCCIPQ9P287 314 aaKnown RBP eCLIP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms