RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 VPS39Q96JC1 886 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 ADAM7Q9H2U9 754 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 LZTS1Q9Y250 596 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 DTNAQ9Y4J8 743 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 SPEF2Q9C093 1822 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 GNGT2O14610 69 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 TPP1O14773 563 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 DHX15O43143 795 aaKnown RBP13.72□□□□□ -0.21
CASC4-201ENST00000299957 BUD23O43709 281 aaKnown RBP13.72□□□□□ -0.21
CASC4-201ENST00000299957 ASS1P00966 412 aaKnown RBP13.72□□□□□ -0.21
CASC4-201ENST00000299957 CDKN2BP42772 138 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 MAP3K7CLP57077 242 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 NRF1Q16656 503 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 RARS2Q5T160 578 aaKnown RBP13.72□□□□□ -0.21
CASC4-201ENST00000299957 CRELD2Q6UXH1 353 aaPredicted RBP13.72□□□□□ -0.21
CASC4-201ENST00000299957 FAM228AQ86W67 206 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 TMPRSS6Q8IU80 811 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 RBM15BQ8NDT2 890 aaKnown RBP13.72□□□□□ -0.21
CASC4-201ENST00000299957 SLC2A14Q8TDB8 520 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 CCDC90BQ9GZT6 254 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 SNX13Q9Y5W8 968 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 ASMTLO95671 621 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 RAG1P15918 1043 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 SPRP35270 261 aaPredicted RBP13.72□□□□□ -0.21
CASC4-201ENST00000299957 ADIGQ0VDE8 80 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 ZNF268Q14587 947 aaPredicted RBP13.72□□□□□ -0.21
CASC4-201ENST00000299957 ACAP1Q15027 740 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 EFHC1Q5JVL4 640 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 VCPIP1Q96JH7 1222 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 PDGFCQ9NRA1 345 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 PRMT7Q9NVM4 692 aaPredicted RBP13.72□□□□□ -0.21
CASC4-201ENST00000299957 ERAP1Q9NZ08 941 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 SLC12A4Q9UP95 1085 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 SPDYE5A6NIY4 337 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 PPP1R12AO14974 1030 aaPredicted RBP13.71□□□□□ -0.21
CASC4-201ENST00000299957 GSC2O15499 205 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 VNN1O95497 513 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 APOEP02649 317 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 VDRP11473 427 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 NAGLUP54802 743 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 C1orf220Q5T0J3 134 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 ARMC3Q5W041 872 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 PLEKHA7Q6IQ23 1121 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 RINLQ6ZS11 566 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 PCDH20Q8N6Y1 951 aaKnown RBP13.71□□□□□ -0.21
CASC4-201ENST00000299957 OR52K1Q8NGK4 314 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 ZNF570Q96NI8 536 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 FIZ1Q96SL8 496 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 CDRT15Q96T59 188 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 CADM1Q9BY67 442 aaKnown RBP13.71□□□□□ -0.21
CASC4-201ENST00000299957 UPF3AQ9H1J1 476 aaKnown RBP13.71□□□□□ -0.21
CASC4-201ENST00000299957 WDR55Q9H6Y2 383 aaPredicted RBP13.71□□□□□ -0.21
CASC4-201ENST00000299957 RUVBL2Q9Y230 463 aaKnown RBP13.71□□□□□ -0.21
CASC4-201ENST00000299957 LRCH1Q9Y2L9 728 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 MAGEA13PA6NCF6 341 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 SRRM3A6NNA2 597 aaPredicted RBP13.71□□□□□ -0.21
CASC4-201ENST00000299957 RNF103O00237 685 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 CYP2C8P10632 490 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 PSMB4P28070 264 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 ESRRGP62508 458 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 SNX32Q86XE0 403 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 AZIN2Q96A70 460 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 PRR11Q96HE9 360 aaPredicted RBP13.71□□□□□ -0.21
CASC4-201ENST00000299957 PGLYRP2Q96PD5 576 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 ZNF184Q99676 751 aaPredicted RBP13.71□□□□□ -0.21
CASC4-201ENST00000299957 GCOM2Q9BZD3 368 aaPredicted RBP13.71□□□□□ -0.21
CASC4-201ENST00000299957 ETNK2Q9NVF9 386 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 ZNF358Q9NW07 568 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 BTBD7Q9P203 1132 aa13.71□□□□□ -0.21
CASC4-201ENST00000299957 KIF1AQ12756 1690 aa13.71□□□□□ -0.22
CASC4-201ENST00000299957 LSM8O95777 96 aaKnown RBP13.71□□□□□ -0.22
CASC4-201ENST00000299957 GOT1P17174 413 aa13.71□□□□□ -0.22
CASC4-201ENST00000299957 PTPRAP18433 802 aa13.71□□□□□ -0.22
CASC4-201ENST00000299957 CCNA1P78396 465 aa13.71□□□□□ -0.22
CASC4-201ENST00000299957 ANKRD20A4Q4UJ75 823 aa13.71□□□□□ -0.22
CASC4-201ENST00000299957 BBS12Q6ZW61 710 aa13.71□□□□□ -0.22
CASC4-201ENST00000299957 PHF13Q86YI8 300 aaPredicted RBP13.71□□□□□ -0.22
CASC4-201ENST00000299957 DEFB106AQ8N104 65 aa13.71□□□□□ -0.22
CASC4-201ENST00000299957 AGBL3Q8NEM8 1001 aa13.71□□□□□ -0.22
CASC4-201ENST00000299957 RDM1Q8NG50 284 aa13.71□□□□□ -0.22
CASC4-201ENST00000299957 APBA2Q99767 749 aa13.71□□□□□ -0.22
CASC4-201ENST00000299957 EBF4Q9BQW3 602 aa13.71□□□□□ -0.22
CASC4-201ENST00000299957 GOLGA2P5Q9HBQ8 144 aa13.71□□□□□ -0.22
CASC4-201ENST00000299957 TAS2R1Q9NYW7 299 aa13.71□□□□□ -0.22
CASC4-201ENST00000299957 SOX13Q9UN79 622 aa13.71□□□□□ -0.22
CASC4-201ENST00000299957 NWD2Q9ULI1 1742 aa13.71□□□□□ -0.22
CASC4-201ENST00000299957 AKAP11Q9UKA4 1901 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 ATP6AP2A0A1C7CYW4 349 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 C3orf70A6NLC5 250 aaPredicted RBP13.7□□□□□ -0.22
CASC4-201ENST00000299957 SIGLEC16A6NMB1 481 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 ATP6AP2O75787 350 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 KLHL2O95198 593 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 ACADSP16219 412 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 EIF4BP23588 611 aaKnown RBP13.7□□□□□ -0.22
CASC4-201ENST00000299957 EPHA3P29320 983 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 HSD17B4P51659 736 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 SPDYCQ5MJ68 293 aa13.7□□□□□ -0.22
CASC4-201ENST00000299957 RNASEH2BQ5TBB1 312 aaKnown RBP13.7□□□□□ -0.22
CASC4-201ENST00000299957 PYROXD2Q8N2H3 581 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms