RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 TAS1R3Q7RTX0 852 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 NUDCD3Q8IVD9 361 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 CHST12Q9NRB3 414 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 COL22A1Q8NFW1 1626 aaPredicted RBP10.52□□□□□ -0.73
GABRB3-201ENST00000299267 ZMYM2Q9UBW7 1377 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 PTPRJQ12913 1337 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 RBAK-RBAKDNI3L0D1 243 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 DNAJC6O75061 913 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 GMNNO75496 209 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 CIB2O75838 187 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 CYP1A2P05177 515 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 HDCP19113 662 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 SEC24CP53992 1094 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 CRADDP78560 199 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 PTK7Q13308 1070 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 PRSS55Q6UWB4 352 aaPredicted RBP10.52□□□□□ -0.73
GABRB3-201ENST00000299267 PPHLN1Q8NEY8 458 aaKnown RBP10.52□□□□□ -0.73
GABRB3-201ENST00000299267 TTC8Q8TAM2 541 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 RSPH1Q8WYR4 309 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 STAMBPL1Q96FJ0 436 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 EGFL8Q99944 293 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 CDC42EP4Q9H3Q1 356 aaKnown RBP10.52□□□□□ -0.73
GABRB3-201ENST00000299267 MYH6P13533 1939 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 C4AP0C0L4 1744 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 TCRBV7S2A1N4TA0A589 114 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 BUD23O43709 281 aaKnown RBP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 CXCL14O95715 111 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 CCL5P13501 91 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 TGM2P21980 687 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 SSTR1P30872 391 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 AKT1P31749 480 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 ERFP50548 548 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 ZNF143P52747 638 aaPredicted RBP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 COPS2P61201 443 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 PCBP1Q15365 356 aaKnown RBP eCLIP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 TARBP2Q15633 366 aaKnown RBP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 USP41Q3LFD5 358 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 TIGD5Q53EQ6 642 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 PLPP4Q5VZY2 271 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 C17orf99Q6UX52 265 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 CTU1Q7Z7A3 348 aaKnown RBP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 AUTS2Q8WXX7 1259 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 EXOC4Q96A65 974 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 SNX27Q96L92 541 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 HSFY1Q96LI6 401 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 MPP6Q9NZW5 540 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 SLC39A10Q9ULF5 831 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 TULP2O00295 520 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 EDNRBP24530 442 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 FRA10AC1Q70Z53 315 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 PCED1BQ96HM7 432 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 TGS1Q96RS0 853 aaKnown RBP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 LGMNQ99538 433 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 TTPALQ9BTX7 342 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 DDX23Q9BUQ8 820 aaKnown RBP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 DUSP16Q9BY84 665 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 FUT8Q9BYC5 575 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 PPARGC1AQ9UBK2 798 aaKnown RBP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 SLC30A1Q9Y6M5 507 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 VIRMAQ69YN4 1812 aaKnown RBP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 MOXD2PA6NHM9 499 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 CFLARO15519 480 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 RAMP2O60895 175 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 ATG7O95352 703 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 POLBP06746 335 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 PECAM1P16284 738 aaPredicted RBP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 ATXN1P54253 815 aaKnown RBP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 PPM1LQ5SGD2 360 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 FOXR2Q6PJQ5 311 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 TRMT10CQ7L0Y3 403 aaKnown RBP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 PHF13Q86YI8 300 aaPredicted RBP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 CLEC4CQ8WTT0 213 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 ANKRD7Q92527 254 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 PRMT1Q99873 361 aaKnown RBP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 SGIP1Q9BQI5 828 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 AGO3Q9H9G7 860 aaKnown RBP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 NHSQ6T4R5 1651 aa10.51□□□□□ -0.73
GABRB3-201ENST00000299267 TNRC6CQ9HCJ0 1690 aaKnown RBP10.51□□□□□ -0.73
GABRB3-201ENST00000299267 MEIS3P2A8K0S8 358 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 PPP1R37O75864 691 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 RARGP13631 454 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 ABCG1P45844 678 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 OXCT1P55809 520 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 SESN3P58005 492 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 TAF10Q12962 218 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 ZRANB3Q5FWF4 1079 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 PRELID2Q8N945 189 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 CFAP61Q8NHU2 1237 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 EXOC2Q96KP1 924 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 LATS2Q9NRM7 1088 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 SLC4A7Q9Y6M7 1214 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 TRIM49D1C9J1S8 452 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 TLR5O60602 858 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 NDUFS3O75489 264 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 CHRNB2P17787 502 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 ATP5C1P36542 298 aaKnown RBP10.5□□□□□ -0.73
GABRB3-201ENST00000299267 SH3PXD2AQ5TCZ1 1133 aa10.5□□□□□ -0.73
GABRB3-201ENST00000299267 TBC1D1Q86TI0 1168 aaPredicted RBP10.5□□□□□ -0.73
GABRB3-201ENST00000299267 DENND1CQ8IV53 801 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms