RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SV2CQ496J9 727 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 C9orf57Q5W0N0 161 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 ZNF571Q7Z3V5 609 aaPredicted RBP22.13■■□□□ 1.13
SMCO4-201ENST00000298966 KIAA1328Q86T90 577 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 THEM5Q8N1Q8 247 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 CPA6Q8N4T0 437 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 SPPL2BQ8TCT7 592 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 EPS8L1Q8TE68 723 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 MRPS31Q92665 395 aaKnown RBP22.13■■□□□ 1.13
SMCO4-201ENST00000298966 AGPAT1Q99943 283 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 SYT11Q9BT88 431 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.13■■□□□ 1.13
SMCO4-201ENST00000298966 INTUQ9ULD6 942 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 PCDHB4Q9Y5E5 795 aa22.13■■□□□ 1.13
SMCO4-201ENST00000298966 OBSL1O75147 1896 aa22.12■■□□□ 1.13
SMCO4-201ENST00000298966 CYP26A1O43174 497 aa22.12■■□□□ 1.13
SMCO4-201ENST00000298966 KRT86O43790 486 aa22.12■■□□□ 1.13
SMCO4-201ENST00000298966 CYP11B1P15538 503 aa22.12■■□□□ 1.13
SMCO4-201ENST00000298966 TNFAIP3P21580 790 aa22.12■■□□□ 1.13
SMCO4-201ENST00000298966 GJA4P35212 333 aa22.12■■□□□ 1.13
SMCO4-201ENST00000298966 CDR1P51861 262 aa22.12■■□□□ 1.13
SMCO4-201ENST00000298966 SMARCB1Q12824 385 aa22.12■■□□□ 1.13
SMCO4-201ENST00000298966 USP39Q53GS9 565 aaKnown RBP22.12■■□□□ 1.13
SMCO4-201ENST00000298966 DNTTIP2Q5QJE6 756 aaKnown RBP22.12■■□□□ 1.13
SMCO4-201ENST00000298966 TRIM72Q6ZMU5 477 aa22.12■■□□□ 1.13
SMCO4-201ENST00000298966 SCNM1Q9BWG6 230 aa22.12■■□□□ 1.13
SMCO4-201ENST00000298966 MYO1AQ9UBC5 1043 aa22.12■■□□□ 1.13
SMCO4-201ENST00000298966 ADAMTS1Q9UHI8 967 aa22.12■■□□□ 1.13
SMCO4-201ENST00000298966 PCDHA13Q9Y5I0 950 aa22.12■■□□□ 1.13
SMCO4-201ENST00000298966 MYO16Q9Y6X6 1858 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 KIAA1549LQ6ZVL6 1849 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 AKAP13Q12802 2813 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 SOBPA7XYQ1 873 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 PJA2O43164 708 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 TOP3BO95985 862 aaKnown RBP22.11■■□□□ 1.13
SMCO4-201ENST00000298966 F11P03951 625 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 HAPLN1P10915 354 aaPredicted RBP22.11■■□□□ 1.13
SMCO4-201ENST00000298966 GZMAP12544 262 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 MAGEA1P43355 309 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 TAF6P49848 677 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 ZNF132P52740 706 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 CDR2Q01850 454 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 KIF5AQ12840 1032 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 PMS2CLQ68D20 193 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 DPH6Q7L8W6 267 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 CYP2U1Q7Z449 544 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 TSTD1Q8NFU3 115 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 GATA6Q92908 595 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 CD101Q93033 1021 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 ECT2Q9H8V3 914 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 CISHQ9NSE2 258 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 GDAP2Q9NXN4 497 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 ABI2Q9NYB9 513 aaPredicted RBP22.11■■□□□ 1.13
SMCO4-201ENST00000298966 NXF1Q9UBU9 619 aaKnown RBP22.11■■□□□ 1.13
SMCO4-201ENST00000298966 NAGPAQ9UK23 515 aa22.11■■□□□ 1.13
SMCO4-201ENST00000298966 NOCTQ9UK39 431 aaKnown RBP22.11■■□□□ 1.13
SMCO4-201ENST00000298966 ASCC3Q8N3C0 2202 aaKnown RBP22.11■■□□□ 1.13
SMCO4-201ENST00000298966 A0A087X0T9 212 aa22.1■■□□□ 1.13
SMCO4-201ENST00000298966 SRRM3A6NNA2 597 aaPredicted RBP22.1■■□□□ 1.13
SMCO4-201ENST00000298966 PAEPP09466 180 aa22.1■■□□□ 1.13
SMCO4-201ENST00000298966 FAM228BP0C875 321 aa22.1■■□□□ 1.13
SMCO4-201ENST00000298966 PNMA6AP0CW24 399 aaPredicted RBP22.1■■□□□ 1.13
SMCO4-201ENST00000298966 ETF1P62495 437 aaKnown RBP22.1■■□□□ 1.13
SMCO4-201ENST00000298966 GFPT1Q06210 699 aaPredicted RBP22.1■■□□□ 1.13
SMCO4-201ENST00000298966 INCA1Q0VD86 236 aa22.1■■□□□ 1.13
SMCO4-201ENST00000298966 ZNF268Q14587 947 aaPredicted RBP22.1■■□□□ 1.13
SMCO4-201ENST00000298966 UAP1L1Q3KQV9 507 aa22.1■■□□□ 1.13
SMCO4-201ENST00000298966 NAIF1Q69YI7 327 aaPredicted RBP22.1■■□□□ 1.13
SMCO4-201ENST00000298966 TXNDC8Q6A555 127 aa22.1■■□□□ 1.13
SMCO4-201ENST00000298966 TMEM270Q6UE05 265 aa22.1■■□□□ 1.13
SMCO4-201ENST00000298966 TMEM150AQ86TG1 271 aa22.1■■□□□ 1.13
SMCO4-201ENST00000298966 MON1AQ86VX9 555 aa22.1■■□□□ 1.13
SMCO4-201ENST00000298966 RBBP8NLQ8NC74 664 aaPredicted RBP22.1■■□□□ 1.13
SMCO4-201ENST00000298966 CCDC26Q8TAB7 109 aa22.1■■□□□ 1.13
SMCO4-201ENST00000298966 SLC30A5Q8TAD4 765 aa22.1■■□□□ 1.13
SMCO4-201ENST00000298966 ZCCHC14Q8WYQ9 949 aaKnown RBP22.1■■□□□ 1.13
SMCO4-201ENST00000298966 ARID3AQ99856 593 aa22.1■■□□□ 1.13
SMCO4-201ENST00000298966 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.1■■□□□ 1.13
SMCO4-201ENST00000298966 NENFQ9UMX5 172 aa22.1■■□□□ 1.13
SMCO4-201ENST00000298966 INVSQ9Y283 1065 aa22.1■■□□□ 1.13
SMCO4-201ENST00000298966 HMGA1P17096 107 aaKnown RBP22.09■■□□□ 1.13
SMCO4-201ENST00000298966 ARHGAP25P42331 645 aa22.09■■□□□ 1.13
SMCO4-201ENST00000298966 ALKBH5Q6P6C2 394 aaKnown RBP22.09■■□□□ 1.13
SMCO4-201ENST00000298966 DCP1BQ8IZD4 617 aaKnown RBP22.09■■□□□ 1.13
SMCO4-201ENST00000298966 RIN3Q8TB24 985 aa22.09■■□□□ 1.13
SMCO4-201ENST00000298966 SPATA18Q8TC71 538 aa22.09■■□□□ 1.13
SMCO4-201ENST00000298966 CALR3Q96L12 384 aaKnown RBP22.09■■□□□ 1.13
SMCO4-201ENST00000298966 KIAA1257Q9ULG3 409 aa22.09■■□□□ 1.13
SMCO4-201ENST00000298966 SPEGQ15772 3267 aa22.09■■□□□ 1.13
SMCO4-201ENST00000298966 CYB561D2O14569 222 aa22.08■■□□□ 1.13
SMCO4-201ENST00000298966 CDX4O14627 284 aaPredicted RBP22.08■■□□□ 1.13
SMCO4-201ENST00000298966 CSH1P0DML2 217 aa22.08■■□□□ 1.13
SMCO4-201ENST00000298966 CSH2P0DML3 217 aa22.08■■□□□ 1.13
SMCO4-201ENST00000298966 IFNAR2P48551 515 aa22.08■■□□□ 1.13
SMCO4-201ENST00000298966 CCDC122Q5T0U0 273 aa22.08■■□□□ 1.13
SMCO4-201ENST00000298966 SLC47A2Q86VL8 602 aa22.08■■□□□ 1.13
SMCO4-201ENST00000298966 UNC93AQ86WB7 457 aa22.08■■□□□ 1.13
SMCO4-201ENST00000298966 TOP6BLQ8N6T0 577 aa22.08■■□□□ 1.13
SMCO4-201ENST00000298966 DEFB124Q8NES8 71 aa22.08■■□□□ 1.13
SMCO4-201ENST00000298966 EZH1Q92800 747 aaPredicted RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms