RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 RIMS3Q9UJD0 308 aa13.96□□□□□ -0.17
RPUSD4-201ENST00000298317 MRPL11Q9Y3B7 192 aaKnown RBP13.96□□□□□ -0.17
RPUSD4-201ENST00000298317 H3BSA7 217 aa13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 MCF2LO15068 1137 aa13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 TOM1L1O75674 476 aa13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 TBXAS1P24557 533 aaPredicted RBP13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 KCNT1Q5JUK3 1230 aa13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 WDR78Q5VTH9 848 aa13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 OLFML1Q6UWY5 402 aa13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 SLC15A3Q8IY34 581 aa13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 PRPF31Q8WWY3 499 aaKnown RBP13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 JDP2Q8WYK2 163 aa13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 MMP19Q99542 508 aa13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 SLC2A11Q9BYW1 496 aa13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 FAM96AQ9H5X1 160 aa13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 AGO4Q9HCK5 861 aaKnown RBP13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 TMOD2Q9NZR1 351 aa13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 FAM198AQ9UFP1 575 aa13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 ZC3H7BQ9UGR2 993 aaKnown RBP13.96□□□□□ -0.18
RPUSD4-201ENST00000298317 EXTL3O43909 919 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 LRCH4O75427 683 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 BBOX1O75936 387 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 TOP3BO95985 862 aaKnown RBP13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 TNNI1P19237 187 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 SLC1A6P48664 564 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 PEX6Q13608 980 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 XKR9Q5GH70 373 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 SYCP2LQ5T4T6 812 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 STXBP5Q5T5C0 1151 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 LRRC8BQ6P9F7 803 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 IYDQ6PHW0 289 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 DHRS4L2Q6PKH6 230 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 TMEM110Q86TL2 294 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 ERI1Q8IV48 349 aaKnown RBP13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 ADCY4Q8NFM4 1077 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 PPP1R14CQ8TAE6 165 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 PHF12Q96QT6 1004 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 SLC9A2Q9UBY0 812 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 SYNPO2Q9UMS6 1093 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 ARHGAP26Q9UNA1 814 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 LRRC37AA6NMS7 1700 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 ZNF195O14628 629 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 APOEP02649 317 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 CAPNS1P04632 268 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 GABRB2P47870 512 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 COG7P83436 770 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 Q6ZNX1 250 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 NIPA1Q7RTP0 329 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 CROCCP3Q8IVE0 287 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 UBR7Q8N806 425 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 FAF2Q96CS3 445 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 FRMD8Q9BZ67 464 aaPredicted RBP13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 ARHGEF38Q9NXL2 777 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 STK39Q9UEW8 545 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 RSL24D1Q9UHA3 163 aaKnown RBP13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 ZNHIT2Q9UHR6 403 aa13.95□□□□□ -0.18
RPUSD4-201ENST00000298317 RIMBP2O15034 1052 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 GH2P01242 217 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 PSMA2P25787 234 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 CRKP46108 304 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 HSPA13P48723 471 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 ROR1Q01973 937 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 ATG14Q6ZNE5 492 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 TIFABQ6ZNK6 161 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 RSPH3Q86UC2 560 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 RFX6Q8HWS3 928 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 PHTF2Q8N3S3 785 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 RSPH1Q8WYR4 309 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 LRGUKQ96M69 825 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 BIRC8Q96P09 236 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 SORT1Q99523 831 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 ANKEF1Q9NU02 776 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 PPP1R1BQ9UD71 204 aaPredicted RBP13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 EMCNQ9ULC0 261 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 GNEQ9Y223 722 aaKnown RBP13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 ARID2Q68CP9 1835 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 LOC100653049A0A140TA62 436 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 KRT34O76011 436 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 COX4I1P13073 169 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 RPL10AP62906 217 aaKnown RBP13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 CDKL1Q00532 357 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 TAS1R3Q7RTX0 852 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 IL31RAQ8NI17 732 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 RIN3Q8TB24 985 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 SPATA18Q8TC71 538 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 DHRS1Q96LJ7 313 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 ZDHHC15Q96MV8 337 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 RTKNQ9BST9 563 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 IDI2Q9BXS1 227 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 INIPQ9NRY2 104 aa13.94□□□□□ -0.18
RPUSD4-201ENST00000298317 SH3PXD2BA1X283 911 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 FAM159BA6NKW6 160 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 SERPINB2P05120 415 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 ZNF23P17027 643 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 OSBPP22059 807 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 CDH5P33151 784 aaPredicted RBP13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 MLH1P40692 756 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 CDK9P50750 372 aaKnown RBP13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 NOMO1Q15155 1222 aa13.93□□□□□ -0.18
RPUSD4-201ENST00000298317 HADHQ16836 314 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms