RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 PLD1Q13393 1074 aa25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 VEPH1Q14D04 833 aa25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 CA9Q16790 459 aa25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 ZC3H12AQ5D1E8 599 aaKnown RBP25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 TFDP3Q5H9I0 405 aa25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 CCDC149Q6ZUS6 474 aa25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 NOA1Q8NC60 698 aaKnown RBP25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 PDZD8Q8NEN9 1154 aa25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 RNF139Q8WU17 664 aa25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 NTAN1Q96AB6 310 aa25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 AP1M1Q9BXS5 423 aa25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 MTMR10Q9NXD2 777 aa25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 NUDT5Q9UKK9 219 aa25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 SYNJ2BP-COX16A0A087WUM0 186 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 IRAK2O43187 625 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 IL4RP24394 825 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 GBP1P32455 592 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 CETN2P41208 172 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 AIF1P55008 147 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 C2orf54Q08AI8 447 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 PDK2Q15119 407 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 LLGL1Q15334 1064 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 DPYSL2Q16555 572 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 RTL10Q7L3V2 364 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 VSIG1Q86XK7 387 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 TDHQ8IZJ6 230 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 MMGT1Q8N4V1 131 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 FAM204AQ9H8W3 233 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 CERS4Q9HA82 394 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 TMEM51Q9NW97 253 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 GPATCH2LQ9NWQ4 482 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 COX16Q9P0S2 106 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 SFMBT1Q9UHJ3 866 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 ASB3Q9Y575 518 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 LAMA3Q16787 3333 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 ATG2AQ2TAZ0 1938 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 ANAPC1Q9H1A4 1944 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 hCG_1818297A0A087WSY0 165 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 ZNF840PA6NDX5 716 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 I6L893 689 aaPredicted RBP25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 KRIT1O00522 736 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 LPXNO60711 386 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 CSPG5O95196 566 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 L1CAMP32004 1257 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 ADRA1BP35368 520 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 RGS19P49795 217 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 ADCY2Q08462 1091 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 SCAPQ12770 1279 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 MAGEB5Q9BZ81 275 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 ANLNQ9NQW6 1124 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 AP4E1Q9UPM8 1137 aa25.61■■□□□ 1.69
GTF2A1-201ENST00000298173 CCDC188H7C350 402 aa25.6■■□□□ 1.69
GTF2A1-201ENST00000298173 CLASP2O75122 1294 aaKnown RBP25.6■■□□□ 1.69
GTF2A1-201ENST00000298173 C8AP07357 584 aa25.6■■□□□ 1.69
GTF2A1-201ENST00000298173 KRT10P13645 584 aa25.6■■□□□ 1.69
GTF2A1-201ENST00000298173 CDH6P55285 790 aa25.6■■□□□ 1.69
GTF2A1-201ENST00000298173 TUBB4BP68371 445 aa25.6■■□□□ 1.69
GTF2A1-201ENST00000298173 DPYSL3Q14195 570 aa25.6■■□□□ 1.69
GTF2A1-201ENST00000298173 ODF2Q5BJF6 829 aa25.6■■□□□ 1.69
GTF2A1-201ENST00000298173 PPP2R2DQ66LE6 453 aa25.6■■□□□ 1.69
GTF2A1-201ENST00000298173 ITIH5Q86UX2 942 aa25.6■■□□□ 1.69
GTF2A1-201ENST00000298173 SLC22A17Q8WUG5 538 aa25.6■■□□□ 1.69
GTF2A1-201ENST00000298173 HEMGNQ9BXL5 484 aa25.6■■□□□ 1.69
GTF2A1-201ENST00000298173 WDCPQ9H6R7 721 aa25.6■■□□□ 1.69
GTF2A1-201ENST00000298173 PCDH18Q9HCL0 1135 aa25.6■■□□□ 1.69
GTF2A1-201ENST00000298173 OLA1Q9NTK5 396 aaKnown RBP25.6■■□□□ 1.69
GTF2A1-201ENST00000298173 PPP3CCP48454 512 aa25.59■■□□□ 1.69
GTF2A1-201ENST00000298173 ADAT2Q7Z6V5 191 aaKnown RBP25.59■■□□□ 1.69
GTF2A1-201ENST00000298173 MAP7D3Q8IWC1 876 aa25.59■■□□□ 1.69
GTF2A1-201ENST00000298173 PRELID2Q8N945 189 aa25.59■■□□□ 1.69
GTF2A1-201ENST00000298173 TSC1Q92574 1164 aa25.59■■□□□ 1.69
GTF2A1-201ENST00000298173 LMAN2LQ9H0V9 348 aa25.59■■□□□ 1.69
GTF2A1-201ENST00000298173 SLC28A3Q9HAS3 691 aa25.59■■□□□ 1.69
GTF2A1-201ENST00000298173 TMPRSS4Q9NRS4 437 aa25.59■■□□□ 1.69
GTF2A1-201ENST00000298173 ZNF487B1APH4 448 aa25.58■■□□□ 1.69
GTF2A1-201ENST00000298173 TBX18O95935 607 aa25.58■■□□□ 1.69
GTF2A1-201ENST00000298173 SND1Q7KZF4 910 aaKnown RBP eCLIP25.58■■□□□ 1.69
GTF2A1-201ENST00000298173 TMEM150AQ86TG1 271 aa25.58■■□□□ 1.69
GTF2A1-201ENST00000298173 MAIP1Q8WWC4 291 aa25.58■■□□□ 1.69
GTF2A1-201ENST00000298173 SLC39A13Q96H72 371 aa25.58■■□□□ 1.69
GTF2A1-201ENST00000298173 SERPINB11Q96P15 392 aa25.58■■□□□ 1.69
GTF2A1-201ENST00000298173 LRRC3Q9BY71 257 aa25.58■■□□□ 1.69
GTF2A1-201ENST00000298173 PRO3102Q9H379 93 aa25.58■■□□□ 1.69
GTF2A1-201ENST00000298173 PLEKHA4Q9H4M7 779 aa25.58■■□□□ 1.69
GTF2A1-201ENST00000298173 ARHGEF38Q9NXL2 777 aa25.58■■□□□ 1.69
GTF2A1-201ENST00000298173 UXTQ9UBK9 157 aaPredicted RBP25.58■■□□□ 1.69
GTF2A1-201ENST00000298173 TNRC18O15417 2968 aaPredicted RBP25.58■■□□□ 1.69
GTF2A1-201ENST00000298173 F11P03951 625 aa25.58■■□□□ 1.68
GTF2A1-201ENST00000298173 NNTQ13423 1086 aa25.58■■□□□ 1.68
GTF2A1-201ENST00000298173 TAF12Q16514 161 aa25.58■■□□□ 1.68
GTF2A1-201ENST00000298173 CYP1B1Q16678 543 aa25.58■■□□□ 1.68
GTF2A1-201ENST00000298173 ARNTL2Q8WYA1 636 aa25.58■■□□□ 1.68
GTF2A1-201ENST00000298173 FAF2Q96CS3 445 aa25.58■■□□□ 1.68
GTF2A1-201ENST00000298173 ZNF512Q96ME7 567 aaPredicted RBP25.58■■□□□ 1.68
GTF2A1-201ENST00000298173 DHX35Q9H5Z1 703 aaKnown RBP25.58■■□□□ 1.68
GTF2A1-201ENST00000298173 CCSER2Q9H7U1 834 aa25.58■■□□□ 1.68
GTF2A1-201ENST00000298173 IL21Q9HBE4 155 aa25.58■■□□□ 1.68
GTF2A1-201ENST00000298173 TRPM5Q9NZQ8 1165 aa25.58■■□□□ 1.68
GTF2A1-201ENST00000298173 TLR6Q9Y2C9 796 aa25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms