RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 DAAM1Q9Y4D1 1078 aa12.64□□□□□ -0.39
HMGB2-201ENST00000296503 CEP83Q9Y592 693 aa12.64□□□□□ -0.39
HMGB2-201ENST00000296503 ZNF318Q5VUA4 2279 aa12.64□□□□□ -0.39
HMGB2-201ENST00000296503 F8VZ95 297 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 GFPT2O94808 682 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 LTFP02788 710 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 STAT1P42224 750 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 GRSF1Q12849 480 aaKnown RBP eCLIP12.63□□□□□ -0.39
HMGB2-201ENST00000296503 FZD5Q13467 585 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 RHBDF2Q6PJF5 856 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 BHLHA9Q7RTU4 235 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 CACNA2D4Q7Z3S7 1137 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 TMEM110Q86TL2 294 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 WDTC1Q8N5D0 677 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 CLDN23Q96B33 292 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 FAM149B1Q96BN6 582 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 PPP1R13BQ96KQ4 1090 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 SPATA6Q9NWH7 488 aaPredicted RBP12.63□□□□□ -0.39
HMGB2-201ENST00000296503 DLGAP2Q9P1A6 1054 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 SFMBT1Q9UHJ3 866 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 E5RJQ4 531 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 H0Y858 1186 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 EPHB6O15197 1021 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 SART1O43290 800 aaKnown RBP12.63□□□□□ -0.39
HMGB2-201ENST00000296503 ADH1CP00326 375 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 CYP17A1P05093 508 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 CHRNB1P11230 501 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 SOX5P35711 763 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 MAGEA9P43362 315 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 RPL34P49207 117 aaKnown RBP12.63□□□□□ -0.39
HMGB2-201ENST00000296503 SNX16P57768 344 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 PDCLQ13371 301 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 LRRC32Q14392 662 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 DGKKQ5KSL6 1271 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 LY6G5CQ5SRR4 150 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 FMNL3Q8IVF7 1028 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 CCAR2Q8N163 923 aaKnown RBP12.63□□□□□ -0.39
HMGB2-201ENST00000296503 C1orf131Q8NDD1 294 aaKnown RBP12.63□□□□□ -0.39
HMGB2-201ENST00000296503 PRSS33Q8NF86 280 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 CD101Q93033 1021 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 CHFRQ96EP1 664 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 P2RY13Q9BPV8 354 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 DCLK3Q9C098 648 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 SYNCQ9H7C4 482 aa12.63□□□□□ -0.39
HMGB2-201ENST00000296503 RBM12Q9NTZ6 932 aaKnown RBP12.63□□□□□ -0.39
HMGB2-201ENST00000296503 TRDMT1O14717 391 aaKnown RBP12.62□□□□□ -0.39
HMGB2-201ENST00000296503 CAPN9O14815 690 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 PAPSS1O43252 624 aaPredicted RBP12.62□□□□□ -0.39
HMGB2-201ENST00000296503 STC2O76061 302 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 TPM1P09493 284 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 NCAM1P13591 858 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 RPS9P46781 194 aaKnown RBP12.62□□□□□ -0.39
HMGB2-201ENST00000296503 PTPN5P54829 565 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 GAD2Q05329 585 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 ANO4Q32M45 955 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 OR6B2Q6IFH4 312 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 FBXO38Q6PIJ6 1188 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 C1orf210Q8IVY1 113 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 ZNF687Q8N1G0 1237 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 TMEM35BQ8NCS4 154 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 FBRSL1Q9HCM7 1045 aaKnown RBP12.62□□□□□ -0.39
HMGB2-201ENST00000296503 SPHK2Q9NRA0 654 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 ZNF510Q9Y2H8 683 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 MIA3Q5JRA6 1907 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 KMT2EQ8IZD2 1858 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 COL4A2P08572 1712 aa12.62□□□□□ -0.39
HMGB2-201ENST00000296503 CCP110O43303 1012 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 LAMTOR5O43504 91 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 ADH5P11766 374 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 JAM2P57087 298 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 ARID5AQ03989 594 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 ANGPT1Q15389 498 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 TMEM196Q5HYL7 178 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 TPGS1Q6ZTW0 290 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 NOP9Q86U38 636 aaKnown RBP12.61□□□□□ -0.39
HMGB2-201ENST00000296503 TMEM25Q86YD3 366 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 DENND1CQ8IV53 801 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 NAT16Q8N8M0 369 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 CPXM1Q96SM3 734 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 IRF2BPLQ9H1B7 796 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 TJP2Q9UDY2 1190 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 HBS1LQ9Y450 684 aaKnown RBP12.61□□□□□ -0.39
HMGB2-201ENST00000296503 ARIH1Q9Y4X5 557 aaPredicted RBP12.61□□□□□ -0.39
HMGB2-201ENST00000296503 V9GYY5 206 aaPredicted RBP12.61□□□□□ -0.39
HMGB2-201ENST00000296503 A0A1B0GTH6 734 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 FAM170AA1A519 330 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 GREM1O60565 184 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 MMEP08473 750 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 SKILP12757 684 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 DRD1P21728 446 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 CORO1AP31146 461 aaKnown RBP12.61□□□□□ -0.39
HMGB2-201ENST00000296503 SLC6A11P48066 632 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 HARS2P49590 506 aaKnown RBP12.61□□□□□ -0.39
HMGB2-201ENST00000296503 YWHAZP63104 245 aaKnown RBP12.61□□□□□ -0.39
HMGB2-201ENST00000296503 CCZ1BP86790 482 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 CCZ1P86791 482 aaPredicted RBP12.61□□□□□ -0.39
HMGB2-201ENST00000296503 FANCCQ00597 558 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 TCF15Q12870 199 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 NR1I3Q14994 352 aa12.61□□□□□ -0.39
HMGB2-201ENST00000296503 EFHC1Q5JVL4 640 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms