RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 MAP2K5Q13163 448 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 KCTD21Q4G0X4 260 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 ZNF280DQ6N043 979 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 CES3Q6UWW8 571 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 INPP5DQ92835 1189 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 CAMKK2Q96RR4 588 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 PPCSQ9HAB8 311 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 KCNMB3Q9NPA1 279 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 WDR35Q9P2L0 1181 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 SLC17A7Q9P2U7 560 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 ADRB2P07550 413 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 MYL6P60660 151 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 CDK16Q00536 496 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 PLOD1Q02809 727 aaPredicted RBP13.84□□□□□ -0.19
HPS3-201ENST00000296051 CYP24A1Q07973 514 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 ITGA9Q13797 1035 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 Q4G0T1 1027 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 GDPD5Q8WTR4 605 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 DTNBP1Q96EV8 351 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 DCUN1D5Q9BTE7 237 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 ADNPQ9H2P0 1102 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 RPS6KL1Q9Y6S9 549 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 RPTORQ8N122 1335 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 SMNDC1O75940 238 aaKnown RBP eCLIP13.84□□□□□ -0.19
HPS3-201ENST00000296051 TAS2R40P59535 323 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 PCSK7Q16549 785 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 MOXD1Q6UVY6 613 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 ALYREFQ86V81 257 aaKnown RBP13.84□□□□□ -0.19
HPS3-201ENST00000296051 WNK4Q96J92 1243 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 KLHL4Q9C0H6 718 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 SMPD4Q9NXE4 827 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 SNX13Q9Y5W8 968 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 ANKRD26Q9UPS8 1709 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 BTNL10A8MVZ5 291 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 SPTLC1O15269 473 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 RPLP2P05387 115 aaKnown RBP13.84□□□□□ -0.19
HPS3-201ENST00000296051 CXCL8P10145 99 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 ARL4DP49703 201 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 OAZ1P54368 228 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 FKBP1AP62942 108 aaKnown RBP13.84□□□□□ -0.19
HPS3-201ENST00000296051 PDK4Q16654 411 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 ZNF677Q86XU0 584 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 DDIASQ8IXT1 998 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 ABRAQ8N0Z2 381 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 ZCCHC9Q8N567 271 aaKnown RBP13.84□□□□□ -0.19
HPS3-201ENST00000296051 RFWD2Q8NHY2 731 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 DIS3LQ8TF46 1054 aaKnown RBP13.84□□□□□ -0.19
HPS3-201ENST00000296051 ZNF384Q8TF68 577 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 KLRG1Q96E93 195 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 PRPF18Q99633 342 aaKnown RBP13.84□□□□□ -0.19
HPS3-201ENST00000296051 GSTA4O15217 222 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 PPP1R11O60927 126 aaPredicted RBP13.83□□□□□ -0.2
HPS3-201ENST00000296051 E2F6O75461 281 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 CHEK2O96017 543 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 AMHP03971 560 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 GRK4P32298 578 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 MSX2P35548 267 aaPredicted RBP13.83□□□□□ -0.2
HPS3-201ENST00000296051 GSCP56915 257 aaPredicted RBP13.83□□□□□ -0.2
HPS3-201ENST00000296051 DENND5BQ6ZUT9 1274 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 SAMD3Q8N6K7 520 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 NRBF2Q96F24 287 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 LRRC19Q9H756 370 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 ATXN2Q99700 1313 aaKnown RBP13.83□□□□□ -0.2
HPS3-201ENST00000296051 KHDC1Q4VXA5 237 aaKnown RBP13.83□□□□□ -0.2
HPS3-201ENST00000296051 ADCK2Q7Z695 626 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 TRABD2AQ86V40 505 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 ZNF786Q8N393 782 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 ATPAF2Q8N5M1 289 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 UCMAQ8WVF2 138 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 PCDH9Q9HC56 1237 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 MSRAQ9UJ68 235 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 SOX13Q9UN79 622 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 CAMTA1Q9Y6Y1 1673 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 EDF1O60869 148 aaKnown RBP13.83□□□□□ -0.2
HPS3-201ENST00000296051 MAP4P27816 1152 aaKnown RBP13.83□□□□□ -0.2
HPS3-201ENST00000296051 TBL3Q12788 808 aaKnown RBP13.83□□□□□ -0.2
HPS3-201ENST00000296051 ELAVL2Q12926 359 aaKnown RBP13.83□□□□□ -0.2
HPS3-201ENST00000296051 ZNF268Q14587 947 aaPredicted RBP13.83□□□□□ -0.2
HPS3-201ENST00000296051 ACAP1Q15027 740 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 CD99L2Q8TCZ2 262 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 DDI1Q8WTU0 396 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 MRPL1Q9BYD6 325 aaKnown RBP13.83□□□□□ -0.2
HPS3-201ENST00000296051 CCDC134Q9H6E4 229 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 PAIP2BQ9ULR5 123 aaKnown RBP13.83□□□□□ -0.2
HPS3-201ENST00000296051 SHOC2Q9UQ13 582 aa13.83□□□□□ -0.2
HPS3-201ENST00000296051 EPHB3P54753 998 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 RIPK1Q13546 671 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 SLC44A4Q53GD3 710 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 CCNJLQ8IV13 435 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 GRIP2Q9C0E4 1043 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 CISHQ9NSE2 258 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 DPP7Q9UHL4 492 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 TM9SF1O15321 606 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 MAP3K13O43283 966 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 NME5P56597 212 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 ROR2Q01974 943 aaKnown RBP13.82□□□□□ -0.2
HPS3-201ENST00000296051 SPDYCQ5MJ68 293 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 PIGWQ7Z7B1 504 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 RIOX2Q8IUF8 465 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 MFN1Q8IWA4 741 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms