RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 TCF4P15884 667 aa15.8■□□□□ 0.12
CCDC140-201ENST00000295226 HOXB8P17481 243 aaPredicted RBP15.8■□□□□ 0.12
CCDC140-201ENST00000295226 CDC25CP30307 473 aa15.8■□□□□ 0.12
CCDC140-201ENST00000295226 PSEN1P49768 467 aa15.8■□□□□ 0.12
CCDC140-201ENST00000295226 GPR158Q5T848 1215 aa15.8■□□□□ 0.12
CCDC140-201ENST00000295226 ARCQ7LC44 396 aa15.8■□□□□ 0.12
CCDC140-201ENST00000295226 ST13P5Q8NFI4 369 aaPredicted RBP15.8■□□□□ 0.12
CCDC140-201ENST00000295226 MRPS31Q92665 395 aaKnown RBP15.8■□□□□ 0.12
CCDC140-201ENST00000295226 ZSWIM3Q96MP5 696 aa15.8■□□□□ 0.12
CCDC140-201ENST00000295226 GCNAQ96QF7 691 aa15.8■□□□□ 0.12
CCDC140-201ENST00000295226 CNPY3Q9BT09 278 aa15.8■□□□□ 0.12
CCDC140-201ENST00000295226 SLC46A2Q9BY10 475 aa15.8■□□□□ 0.12
CCDC140-201ENST00000295226 SMG9Q9H0W8 520 aaKnown RBP15.8■□□□□ 0.12
CCDC140-201ENST00000295226 IP6K2Q9UHH9 426 aa15.8■□□□□ 0.12
CCDC140-201ENST00000295226 RASAL2Q9UJF2 1139 aa15.8■□□□□ 0.12
CCDC140-201ENST00000295226 MRPS23Q9Y3D9 190 aaKnown RBP15.8■□□□□ 0.12
CCDC140-201ENST00000295226 TRUB2O95900 331 aaKnown RBP15.79■□□□□ 0.12
CCDC140-201ENST00000295226 OAS1P00973 400 aaKnown RBP15.79■□□□□ 0.12
CCDC140-201ENST00000295226 HMBSP08397 361 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 POU2F2P09086 479 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 KCNA5P22460 613 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 PPP3CCP48454 512 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 HADHBP55084 474 aaKnown RBP15.79■□□□□ 0.12
CCDC140-201ENST00000295226 SLC25A52Q3SY17 297 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 DAAM2Q86T65 1068 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 TTC16Q8NEE8 873 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 FAM172AQ8WUF8 416 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 NT5C3BQ969T7 300 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 NACA2Q9H009 215 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 FAM204AQ9H8W3 233 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 GKN1Q9NS71 199 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 DDIT4Q9NX09 232 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 SMPD4Q9NXE4 827 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 DPYSL4O14531 572 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 PROSCO94903 275 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 FTCDO95954 541 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 HDCP19113 662 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 COMTP21964 271 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 SSR1P43307 286 aaKnown RBP15.79■□□□□ 0.12
CCDC140-201ENST00000295226 HDAC4P56524 1084 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 TUBB4BP68371 445 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 ATAT1Q5SQI0 421 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 CES5AQ6NT32 575 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 RNF10Q8N5U6 811 aaKnown RBP15.79■□□□□ 0.12
CCDC140-201ENST00000295226 LRRC57Q8N9N7 239 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 SLITRK6Q9H5Y7 841 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 TMPRSS4Q9NRS4 437 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 PIGVQ9NUD9 493 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 MARCH2Q9P0N8 246 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 PCSK1NQ9UHG2 260 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 ALG6Q9Y672 507 aa15.79■□□□□ 0.12
CCDC140-201ENST00000295226 SLC12A8A0AV02 714 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 ZNF197O14709 1029 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 URI1O94763 535 aaPredicted RBP15.78■□□□□ 0.12
CCDC140-201ENST00000295226 FSHRP23945 695 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 ATP5C1P36542 298 aaKnown RBP15.78■□□□□ 0.12
CCDC140-201ENST00000295226 PTPN9P43378 593 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 ZXDBP98169 803 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 DEUP1Q05D60 604 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 PIGHQ14442 188 aaPredicted RBP15.78■□□□□ 0.12
CCDC140-201ENST00000295226 ZNF569Q5MCW4 686 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 CC2D1AQ6P1N0 951 aaPredicted RBP15.78■□□□□ 0.12
CCDC140-201ENST00000295226 MSANTD2Q6P1R3 559 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 SCYL2Q6P3W7 929 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 BEND5Q7L4P6 421 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 GET4Q7L5D6 327 aaPredicted RBP15.78■□□□□ 0.12
CCDC140-201ENST00000295226 MNS1Q8NEH6 495 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 FNIP1Q8TF40 1166 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 WBP2Q969T9 261 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 MAGEB5Q9BZ81 275 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 SMOC2Q9H3U7 446 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 WDR6Q9NNW5 1121 aaKnown RBP15.78■□□□□ 0.12
CCDC140-201ENST00000295226 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.78■□□□□ 0.12
CCDC140-201ENST00000295226 DNMT3LQ9UJW3 386 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 STAP1Q9ULZ2 295 aa15.78■□□□□ 0.12
CCDC140-201ENST00000295226 PACSIN2Q9UNF0 486 aaPredicted RBP15.78■□□□□ 0.12
CCDC140-201ENST00000295226 SCAMP3O14828 347 aaKnown RBP15.77■□□□□ 0.12
CCDC140-201ENST00000295226 LRCH4O75427 683 aa15.77■□□□□ 0.12
CCDC140-201ENST00000295226 FGF19O95750 216 aa15.77■□□□□ 0.12
CCDC140-201ENST00000295226 MBL2P11226 248 aaPredicted RBP15.77■□□□□ 0.12
CCDC140-201ENST00000295226 TAS2R40P59535 323 aa15.77■□□□□ 0.12
CCDC140-201ENST00000295226 ITIH3Q06033 890 aa15.77■□□□□ 0.12
CCDC140-201ENST00000295226 TXNRD3NBQ6F5E7 133 aa15.77■□□□□ 0.12
CCDC140-201ENST00000295226 FAM131BQ86XD5 332 aa15.77■□□□□ 0.12
CCDC140-201ENST00000295226 LEMD2Q8NC56 503 aa15.77■□□□□ 0.12
CCDC140-201ENST00000295226 SMRP1Q8NCR6 262 aa15.77■□□□□ 0.12
CCDC140-201ENST00000295226 CENPIQ92674 756 aaPredicted RBP15.77■□□□□ 0.12
CCDC140-201ENST00000295226 TRIM62Q9BVG3 475 aa15.77■□□□□ 0.12
CCDC140-201ENST00000295226 UBE2ZQ9H832 354 aaPredicted RBP15.77■□□□□ 0.12
CCDC140-201ENST00000295226 ANLNQ9NQW6 1124 aa15.77■□□□□ 0.12
CCDC140-201ENST00000295226 CD207Q9UJ71 328 aa15.77■□□□□ 0.12
CCDC140-201ENST00000295226 CLUHO75153 1309 aa15.77■□□□□ 0.12
CCDC140-201ENST00000295226 UNC80Q8N2C7 3258 aa15.77■□□□□ 0.11
CCDC140-201ENST00000295226 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.76■□□□□ 0.11
CCDC140-201ENST00000295226 EFCAB8A8MWE9 144 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 IGLV3-25P01717 112 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 CKMP06732 381 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 IRF1P10914 325 aa15.76■□□□□ 0.11
CCDC140-201ENST00000295226 SP100P23497 879 aaPredicted RBP15.76■□□□□ 0.11
CCDC140-201ENST00000295226 IL1R2P27930 398 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms