RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ZNF677Q86XU0 584 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 PCDHGA3Q9Y5H0 932 aa16.56■□□□□ 0.24
SSRP1-202ENST00000293880 TSPAN3O60637 253 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 GUCY1B2O75343 617 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 ATG7O95352 703 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 LCA5LO95447 670 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 CYP2C9P11712 490 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 ACO1P21399 889 aaKnown RBP16.55■□□□□ 0.24
SSRP1-202ENST00000293880 YWHAZP63104 245 aaKnown RBP16.55■□□□□ 0.24
SSRP1-202ENST00000293880 Q4G0T1 1027 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 COLGALT1Q8NBJ5 622 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 C19orf60Q96EN9 201 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 ZNF70Q9UC06 446 aaPredicted RBP16.55■□□□□ 0.24
SSRP1-202ENST00000293880 WBP11Q9Y2W2 641 aaKnown RBP16.55■□□□□ 0.24
SSRP1-202ENST00000293880 PTPN4P29074 926 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 MAPK9P45984 424 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 ARMC3Q5W041 872 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 ATG14Q6ZNE5 492 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 DCP1BQ8IZD4 617 aaKnown RBP16.55■□□□□ 0.24
SSRP1-202ENST00000293880 CPA3P15088 417 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 PEX5P50542 639 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 PPIDQ08752 370 aaKnown RBP16.55■□□□□ 0.24
SSRP1-202ENST00000293880 KCNV1Q6PIU1 500 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 BTN2A1Q7KYR7 527 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 ZCCHC7Q8N3Z6 543 aaKnown RBP16.55■□□□□ 0.24
SSRP1-202ENST00000293880 ZNF624Q9P2J8 865 aaPredicted RBP16.55■□□□□ 0.24
SSRP1-202ENST00000293880 F5H5T6 163 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 CBX6O95503 412 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 ODC1P11926 461 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 MTFR1Q15390 333 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 NRF1Q16656 503 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 EDRF1Q3B7T1 1238 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 ANKS6Q68DC2 871 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 KLHL24Q6TFL4 600 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 EFCAB3Q8N7B9 438 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 ENTPD7Q9NQZ7 604 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 TDRKHQ9Y2W6 561 aaKnown RBP16.55■□□□□ 0.24
SSRP1-202ENST00000293880 LGR5O75473 907 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 BCL10O95999 233 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 PRKCQQ04759 706 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 EFEMP1Q12805 493 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 DNAJC14Q6Y2X3 702 aaPredicted RBP16.55■□□□□ 0.24
SSRP1-202ENST00000293880 ZNF571Q7Z3V5 609 aaPredicted RBP16.55■□□□□ 0.24
SSRP1-202ENST00000293880 GRIP2Q9C0E4 1043 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 CEP44Q9C0F1 390 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 COMMD8Q9NX08 183 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 MAP10Q9P2G4 905 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 RWDD3Q9Y3V2 267 aa16.55■□□□□ 0.24
SSRP1-202ENST00000293880 TAF6P49848 677 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 FXR2P51116 673 aaKnown RBP eCLIP16.54■□□□□ 0.249e-7■■■□□ 16
SSRP1-202ENST00000293880 FAM120BQ96EK7 910 aaKnown RBP16.54■□□□□ 0.24
SSRP1-202ENST00000293880 MAP3K14Q99558 947 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 BCL2L14Q9BZR8 327 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 NAALADL1Q9UQQ1 740 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 DYRK1BQ9Y463 629 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 CNOT3O75175 753 aaKnown RBP16.54■□□□□ 0.24
SSRP1-202ENST00000293880 KRT6AP02538 564 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 KRT6BP04259 564 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 KLRK1P26718 216 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 RGS2P41220 211 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 KRT6CP48668 564 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 ZNF284Q2VY69 593 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 OOSP2Q86WS3 158 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 DENND6AQ8IWF6 608 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 TBATAQ96M53 351 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 CBWD1Q9BRT8 395 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 RIPK2O43353 540 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 VPS72Q15906 364 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 FAM131BQ86XD5 332 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 OR6Y1Q8NGX8 325 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 PYDC1Q8WXC3 89 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 SPATA31A6Q5VVP1 1343 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 TTLL13PA6NNM8 815 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 LRG1P02750 347 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 TSGA10IPQ3SY00 556 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 ZNF618Q5T7W0 954 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 NOTUMQ6P988 496 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.54■□□□□ 0.24
SSRP1-202ENST00000293880 STX12Q86Y82 276 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 SP8Q8IXZ3 490 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 RNFT2Q96EX2 444 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 OSGEPL1Q9H4B0 414 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 SLC38A7Q9NVC3 462 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 KCNH4Q9UQ05 1017 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 KPNA4O00629 521 aaPredicted RBP16.54■□□□□ 0.24
SSRP1-202ENST00000293880 INPP4BO15327 924 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 HOXD10P28358 340 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 ADGRF2Q8IZF7 708 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 SPPL2AQ8TCT8 520 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 POMKQ9H5K3 350 aa16.54■□□□□ 0.24
SSRP1-202ENST00000293880 TP73O15350 636 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 ALDH1A2O94788 518 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 GARTP22102 1010 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 THPOP40225 353 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 KRR1Q13601 381 aaKnown RBP16.53■□□□□ 0.24
SSRP1-202ENST00000293880 PLCL1Q15111 1095 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 ANGEL2Q5VTE6 544 aaKnown RBP16.53■□□□□ 0.24
SSRP1-202ENST00000293880 MRNIPQ6NTE8 343 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 AADACL2Q6P093 401 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 IZUMO1Q8IYV9 350 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms