RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 PHLDB2Q86SQ0 1253 aa13.95□□□□□ -0.18
VPS28-201ENST00000292510 TAC4Q86UU9 113 aa13.95□□□□□ -0.18
VPS28-201ENST00000292510 C12orf40Q86WS4 652 aa13.95□□□□□ -0.18
VPS28-201ENST00000292510 XYLT1Q86Y38 959 aa13.95□□□□□ -0.18
VPS28-201ENST00000292510 TMEM25Q86YD3 366 aa13.95□□□□□ -0.18
VPS28-201ENST00000292510 DENND1CQ8IV53 801 aa13.95□□□□□ -0.18
VPS28-201ENST00000292510 DEFB106AQ8N104 65 aa13.95□□□□□ -0.18
VPS28-201ENST00000292510 SLC30A5Q8TAD4 765 aa13.95□□□□□ -0.18
VPS28-201ENST00000292510 CPLX3Q8WVH0 158 aa13.95□□□□□ -0.18
VPS28-201ENST00000292510 C18orf8Q96DM3 657 aa13.95□□□□□ -0.18
VPS28-201ENST00000292510 AGPAT1Q99943 283 aa13.95□□□□□ -0.18
VPS28-201ENST00000292510 POPDC2Q9HBU9 364 aa13.95□□□□□ -0.18
VPS28-201ENST00000292510 SPHK2Q9NRA0 654 aa13.95□□□□□ -0.18
VPS28-201ENST00000292510 AGO1Q9UL18 857 aaKnown RBP13.95□□□□□ -0.18
VPS28-201ENST00000292510 MYO6Q9UM54 1294 aa13.95□□□□□ -0.18
VPS28-201ENST00000292510 MRPS17Q9Y2R5 130 aaKnown RBP13.95□□□□□ -0.18
VPS28-201ENST00000292510 HBS1LQ9Y450 684 aaKnown RBP13.95□□□□□ -0.18
VPS28-201ENST00000292510 MUC6Q6W4X9 2439 aa13.95□□□□□ -0.18
VPS28-201ENST00000292510 CHRNB1P11230 501 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 ADH5P11766 374 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 UNGP13051 313 aaPredicted RBP13.94□□□□□ -0.18
VPS28-201ENST00000292510 COL9A1P20849 921 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 OPRD1P41143 372 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 SLC6A11P48066 632 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 GALK1P51570 392 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 MESP2Q0VG99 397 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 TRIP4Q15650 581 aaPredicted RBP13.94□□□□□ -0.18
VPS28-201ENST00000292510 DCAF6Q58WW2 860 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 FIGNQ5HY92 759 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 EFHC1Q5JVL4 640 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 SFMBT2Q5VUG0 894 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 FSTL4Q6MZW2 842 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 TRIM72Q6ZMU5 477 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 MMS22LQ6ZRQ5 1243 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 GAS2L3Q86XJ1 694 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 NAT16Q8N8M0 369 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 OLIG1Q8TAK6 271 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 BHMTQ93088 406 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 PLD4Q96BZ4 506 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 OTUB2Q96DC9 234 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 P2RY11Q96G91 374 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 SLC2A13Q96QE2 648 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 NELL2Q99435 816 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 C11orf70Q9BRQ4 267 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 OSBPL6Q9BZF3 934 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 DCLK3Q9C098 648 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 LMAN1LQ9HAT1 526 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 ASNSD1Q9NWL6 643 aa13.94□□□□□ -0.18
VPS28-201ENST00000292510 GOLGA8SH3BPF8 625 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 TRDMT1O14717 391 aaKnown RBP13.93□□□□□ -0.18
VPS28-201ENST00000292510 AP5Z1O43299 807 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 CBFA2T2O43439 604 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 HSF2BPO75031 334 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 DAB1O75553 588 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 ADH1CP00326 375 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 EGFP01133 1207 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 GYPCP04921 128 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 GLI1P08151 1106 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 SKILP12757 684 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 TBX4P57082 545 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 SNX16P57768 344 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 RNASE9P60153 205 aaKnown RBP13.93□□□□□ -0.18
VPS28-201ENST00000292510 CLEC16AQ2KHT3 1053 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 ANO4Q32M45 955 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 TMEM196Q5HYL7 178 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 FAM102AQ5T9C2 384 aaPredicted RBP13.93□□□□□ -0.18
VPS28-201ENST00000292510 C1orf228Q6PIY5 440 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 Q6ZS52 159 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 TOGARAM2Q6ZUX3 1019 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 BEND5Q7L4P6 421 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 SLC26A9Q7LBE3 791 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 DTWD2Q8NBA8 298 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 EZH1Q92800 747 aaPredicted RBP13.93□□□□□ -0.18
VPS28-201ENST00000292510 CD101Q93033 1021 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 CLDN23Q96B33 292 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 SERPINB11Q96P15 392 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 P2RY13Q9BPV8 354 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 SYT11Q9BT88 431 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 NUP58Q9BVL2 599 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 EDEM3Q9BZQ6 932 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 RBSNQ9H1K0 784 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 HAUS4Q9H6D7 363 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 AIPL1Q9NZN9 384 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 MYOFQ9NZM1 2061 aa13.93□□□□□ -0.18
VPS28-201ENST00000292510 MIA3Q5JRA6 1907 aa13.92□□□□□ -0.18
VPS28-201ENST00000292510 SYNJ2BP-COX16A0A087WUM0 186 aa13.92□□□□□ -0.18
VPS28-201ENST00000292510 A0A1W2PQJ5 194 aa13.92□□□□□ -0.18
VPS28-201ENST00000292510 ANTXRLA6NF34 631 aa13.92□□□□□ -0.18
VPS28-201ENST00000292510 NEDD8-MDP1E9PL57 170 aa13.92□□□□□ -0.18
VPS28-201ENST00000292510 TRIM24O15164 1050 aa13.92□□□□□ -0.18
VPS28-201ENST00000292510 NCAM2O15394 837 aa13.92□□□□□ -0.18
VPS28-201ENST00000292510 GJB6O95452 261 aa13.92□□□□□ -0.18
VPS28-201ENST00000292510 TRUB2O95900 331 aaKnown RBP13.92□□□□□ -0.18
VPS28-201ENST00000292510 IGLV3-27P01718 113 aa13.92□□□□□ -0.18
VPS28-201ENST00000292510 TPM3P06753 285 aa13.92□□□□□ -0.18
VPS28-201ENST00000292510 CCDC172P0C7W6 258 aa13.92□□□□□ -0.18
VPS28-201ENST00000292510 MMP8P22894 467 aa13.92□□□□□ -0.18
VPS28-201ENST00000292510 HARS2P49590 506 aaKnown RBP13.92□□□□□ -0.18
VPS28-201ENST00000292510 AMPD2Q01433 879 aa13.92□□□□□ -0.18
VPS28-201ENST00000292510 CENPCQ03188 943 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms