RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 TM9SF1O15321 606 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 TRPA1O75762 1119 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 KCNA3P22001 575 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 NLGN2Q8NFZ4 835 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 FAM136AQ96C01 138 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 CDCA5Q96FF9 252 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 TUBB6Q9BUF5 446 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 NUDT5Q9UKK9 219 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 MAGEB2O15479 319 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 SLC25A27O95847 323 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 POTEAQ6S8J7 498 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 ERO1BQ86YB8 467 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 MPP5Q8N3R9 675 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 DNAJB3Q8WWF6 145 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 PRR11Q96HE9 360 aaPredicted RBP16.43■□□□□ 0.22
SMAD6-201ENST00000288840 CAMKK2Q96RR4 588 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 PEBP4Q96S96 227 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 DDX50Q9BQ39 737 aaKnown RBP16.43■□□□□ 0.22
SMAD6-201ENST00000288840 BTBD10Q9BSF8 475 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 ATXN3LQ9H3M9 355 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.43■□□□□ 0.22
SMAD6-201ENST00000288840 SIX4Q9UIU6 781 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 TNFSF13BQ9Y275 285 aa16.43■□□□□ 0.22
SMAD6-201ENST00000288840 EEF2KO00418 725 aaKnown RBP16.42■□□□□ 0.22
SMAD6-201ENST00000288840 APOEP02649 317 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 TFE3P19532 575 aaPredicted RBP16.42■□□□□ 0.22
SMAD6-201ENST00000288840 ADORA2AP29274 412 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 TPI1P60174 286 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 OLIG2Q13516 323 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 DDIT4Q9NX09 232 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 NDE1Q9NXR1 346 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 M0QZ92 97 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 CILPO75339 1184 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 MT-CO1P00395 513 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 SLC25A3Q00325 362 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 SLC6A3Q01959 620 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 KLC1Q07866 573 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 PEX6Q13608 980 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 KHDC1Q4VXA5 237 aaKnown RBP16.42■□□□□ 0.22
SMAD6-201ENST00000288840 PDZD4Q76G19 769 aaPredicted RBP16.42■□□□□ 0.22
SMAD6-201ENST00000288840 CMC1Q7Z7K0 106 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 SCN4BQ8IWT1 228 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 PIP4K2CQ8TBX8 421 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 NXF3Q9H4D5 531 aaKnown RBP16.42■□□□□ 0.22
SMAD6-201ENST00000288840 PCDH18Q9HCL0 1135 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 C20orf96Q9NUD7 363 aaPredicted RBP16.42■□□□□ 0.22
SMAD6-201ENST00000288840 RECQL4O94761 1208 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 LAMC2Q13753 1193 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 GRIK4Q16099 956 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 PCSK7Q16549 785 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 SLC45A4Q5BKX6 768 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 PDLIM7Q9NR12 457 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 GEMIN8Q9NWZ8 242 aaKnown RBP16.42■□□□□ 0.22
SMAD6-201ENST00000288840 STAP1Q9ULZ2 295 aa16.42■□□□□ 0.22
SMAD6-201ENST00000288840 HIC1Q14526 733 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 MAP7D1Q3KQU3 841 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 HSP90AA5PQ58FG0 334 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 PPM1JQ5JR12 505 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 CGB2Q6NT52 195 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 NRDE2Q9H7Z3 1164 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 ARHGEF3Q9NR81 526 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 MFHAS1Q9Y4C4 1052 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 GAS2O43903 313 aaKnown RBP16.41■□□□□ 0.22
SMAD6-201ENST00000288840 METTL18O95568 372 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 GPD2P43304 727 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 CDK16Q00536 496 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 SLC25A11Q02978 314 aaKnown RBP16.41■□□□□ 0.22
SMAD6-201ENST00000288840 TCHHL1Q5QJ38 904 aaPredicted RBP16.41■□□□□ 0.22
SMAD6-201ENST00000288840 NAT8LQ8N9F0 302 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 PCDH19Q8TAB3 1148 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 LENG1Q96BZ8 264 aaPredicted RBP16.41■□□□□ 0.22
SMAD6-201ENST00000288840 CCDC134Q9H6E4 229 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 DCLRE1BQ9H816 532 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 RNF103O00237 685 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 XPOTO43592 962 aaKnown RBP16.41■□□□□ 0.22
SMAD6-201ENST00000288840 B4GALT4O60513 344 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 CYP2B6P20813 491 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 PSMB4P28070 264 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 MSX2P35548 267 aaPredicted RBP16.41■□□□□ 0.22
SMAD6-201ENST00000288840 SERPINB5P36952 375 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 YWHAZP63104 245 aaKnown RBP16.41■□□□□ 0.22
SMAD6-201ENST00000288840 CCDC142Q17RM4 750 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 MMEL1Q495T6 779 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 BZW1Q7L1Q6 419 aaKnown RBP16.41■□□□□ 0.22
SMAD6-201ENST00000288840 GPRC5AQ8NFJ5 357 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 TSC22D3Q99576 134 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 XYLT2Q9H1B5 865 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 GTSE1Q9NYZ3 720 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 CDK5RAP2Q96SN8 1893 aa16.41■□□□□ 0.22
SMAD6-201ENST00000288840 ZNF280AP59817 542 aaPredicted RBP16.4■□□□□ 0.22
SMAD6-201ENST00000288840 PDK2Q15119 407 aa16.4■□□□□ 0.22
SMAD6-201ENST00000288840 NOMO1Q15155 1222 aa16.4■□□□□ 0.22
SMAD6-201ENST00000288840 UNC5AQ6ZN44 842 aa16.4■□□□□ 0.22
SMAD6-201ENST00000288840 STKLD1Q8NE28 680 aa16.4■□□□□ 0.22
SMAD6-201ENST00000288840 GSDMBQ8TAX9 411 aa16.4■□□□□ 0.22
SMAD6-201ENST00000288840 HTR3CQ8WXA8 447 aa16.4■□□□□ 0.22
SMAD6-201ENST00000288840 MIEF2Q96C03 454 aa16.4■□□□□ 0.22
SMAD6-201ENST00000288840 TASP1Q9H6P5 420 aa16.4■□□□□ 0.22
SMAD6-201ENST00000288840 COL5A3P25940 1745 aaPredicted RBP16.4■□□□□ 0.22
SMAD6-201ENST00000288840 PRPF4O43172 522 aaKnown RBP eCLIP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms