RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 TRIM17Q9Y577 477 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 SF3B1O75533 1304 aaKnown RBP eCLIP10.57□□□□□ -0.72
C9orf43-201ENST00000288462 SCN5AQ14524 2016 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 E7ESA3 106 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 H7C0C1 242 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 PITPNM1O00562 1244 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 EIF3HO15372 352 aaKnown RBP eCLIP10.57□□□□□ -0.72
C9orf43-201ENST00000288462 TMEM63AO94886 807 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 USP17L7P0C7H9 530 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 BDNFP23560 247 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 HPDP32754 393 aaPredicted RBP10.57□□□□□ -0.72
C9orf43-201ENST00000288462 ATP5OP48047 213 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 NR2C2P49116 596 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 IRAK1P51617 712 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 GNGT1P63211 74 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 YWHAHQ04917 246 aaPredicted RBP10.57□□□□□ -0.72
C9orf43-201ENST00000288462 DEUP1Q05D60 604 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 AUHQ13825 339 aaKnown RBP10.57□□□□□ -0.72
C9orf43-201ENST00000288462 HIF1AQ16665 826 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 NCBP2-AS2Q69YL0 99 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 C9orf72Q96LT7 481 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 QKIQ96PU8 341 aaKnown RBP eCLIP10.57□□□□□ -0.72
C9orf43-201ENST00000288462 MAGEB5Q9BZ81 275 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 STMN4Q9H169 189 aaPredicted RBP10.57□□□□□ -0.72
C9orf43-201ENST00000288462 WDR6Q9NNW5 1121 aaKnown RBP10.57□□□□□ -0.72
C9orf43-201ENST00000288462 BCCIPQ9P287 314 aaKnown RBP eCLIP10.57□□□□□ -0.72
C9orf43-201ENST00000288462 HEY1Q9Y5J3 304 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 H3BRJ5 948 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 ALOX15BO15296 676 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 RGS16O15492 202 aaPredicted RBP10.56□□□□□ -0.72
C9orf43-201ENST00000288462 OAZ2O95190 189 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 GOT1P17174 413 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 ARL4AP40617 200 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 MDH1P40925 334 aaKnown RBP10.56□□□□□ -0.72
C9orf43-201ENST00000288462 GBE1Q04446 702 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 CBLBQ13191 982 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 SLC45A4Q5BKX6 768 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 LEKR1Q6ZMV7 388 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 CENPUQ71F23 418 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 BEND5Q7L4P6 421 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 PYROXD2Q8N2H3 581 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 RNF139Q8WU17 664 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 OLFM3Q96PB7 478 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 ARHGEF4Q9NR80 690 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 PAK5Q9P286 719 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 LGALS13Q9UHV8 139 aa10.56□□□□□ -0.72
C9orf43-201ENST00000288462 FNDC1Q4ZHG4 1894 aaPredicted RBP10.56□□□□□ -0.72
C9orf43-201ENST00000288462 SMIM23A6NLE4 172 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 SRRM3A6NNA2 597 aaPredicted RBP10.55□□□□□ -0.72
C9orf43-201ENST00000288462 CAPN9O14815 690 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 KCNN4O15554 427 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 IVLP07476 585 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 RBL1P28749 1068 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 MAGEA6P43360 314 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 NRLP54845 237 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 GAD2Q05329 585 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 SLC10A2Q12908 348 aaPredicted RBP10.55□□□□□ -0.72
C9orf43-201ENST00000288462 SEMA3BQ13214 749 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 DPYSQ14117 519 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 KCNJ11Q14654 390 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 STAT4Q14765 748 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 FASTKD3Q14CZ7 662 aaKnown RBP10.55□□□□□ -0.72
C9orf43-201ENST00000288462 LONRF1Q17RB8 773 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 EFHC2Q5JST6 749 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 LRRC31Q6UY01 552 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 C4orf50Q6ZRC1 276 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 CTU1Q7Z7A3 348 aaKnown RBP10.55□□□□□ -0.72
C9orf43-201ENST00000288462 SLC7A14Q8TBB6 771 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 TRIM62Q9BVG3 475 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 ZCWPW1Q9H0M4 648 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 EURLQ9NYK6 297 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 DTLQ9NZJ0 730 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 DNAJB4Q9UDY4 337 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 BRCA2P51587 3418 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 CEP350Q5VT06 3117 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 TTC3P53804 2025 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 MICAL3Q7RTP6 2002 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 A0A087WUV0 522 aaPredicted RBP10.55□□□□□ -0.72
C9orf43-201ENST00000288462 TCRBV7S3A2A0A539 114 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 TLDC2A0PJX2 215 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 ERICH4A6NGS2 130 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 ENPP3O14638 875 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 SYN3O14994 580 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 CHADO15335 359 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 NCAM1P13591 858 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 AMPD1P23109 780 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 SLCO1A2P46721 670 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 ARL4CP56559 192 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 HTRA3P83110 453 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 GUCY1A3Q02108 690 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 NME3Q13232 169 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 C4orf22Q6V702 233 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 B4GALNT4Q76KP1 1039 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 DBF4BQ8NFT6 615 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 TET1Q8NFU7 2136 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 SEPT8Q92599 483 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 APBB2Q92870 758 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 CNOT10Q9H9A5 744 aaKnown RBP10.55□□□□□ -0.72
C9orf43-201ENST00000288462 TMPRSS4Q9NRS4 437 aa10.55□□□□□ -0.72
C9orf43-201ENST00000288462 ETNK2Q9NVF9 386 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms