RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PEBP4Q96S96 227 aa19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 IL21Q9HBE4 155 aa19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 WDR6Q9NNW5 1121 aaKnown RBP19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 TMEM51Q9NW97 253 aa19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 ZDHHC7Q9NXF8 308 aa19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 DDX56Q9NY93 547 aaKnown RBP19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 SMARCAL1Q9NZC9 954 aa19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 COX16Q9P0S2 106 aa19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 ATG2AQ2TAZ0 1938 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 TMEM265A0A087WTH1 108 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 CTAGE15A4D2H0 777 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 EFCAB8A8MWE9 144 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 TLR5O60602 858 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 F11P03951 625 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 CTAGE8P0CG41 777 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 TADA2BQ86TJ2 420 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 CTAGE6Q86UF2 777 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 FAM131BQ86XD5 332 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 TMC8Q8IU68 726 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 CTAGE4Q8IX94 777 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 RASGEF1CQ8N431 466 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 CCSER2Q9H7U1 834 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 SFMBT1Q9UHJ3 866 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 TRANK1O15050 2925 aa19.68■□□□□ 0.74
PDLIM3-202ENST00000284770 IRAK2O43187 625 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 TBX18O95935 607 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 RARAP10276 462 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 TUBP50607 506 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 SMTNL2Q2TAL5 461 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 KCNT1Q5JUK3 1230 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 C10orf120Q5SQS8 335 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 HECTD3Q5T447 861 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 SND1Q7KZF4 910 aaKnown RBP eCLIP19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 HS6ST3Q8IZP7 471 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 ACTRT1Q8TDG2 376 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 TEKT4Q8WW24 435 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 SERPINB11Q96P15 392 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 NSUN3Q9H649 340 aaKnown RBP19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 ASAH2Q9NR71 780 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 XYLBO75191 536 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 ZRANB2O95218 330 aaKnown RBP eCLIP19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 POU2F2P09086 479 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 PYGMP11217 842 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 PTPN2P17706 415 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 CXCR3P49682 368 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 RBM10P98175 930 aaKnown RBP19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 ITIH3Q06033 890 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 EFEMP1Q12805 493 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 ZFYVE27Q5T4F4 411 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 ERMARDQ5T6L9 678 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 CCDC181Q5TID7 509 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 KLHDC10Q6PID8 442 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 CMASQ8NFW8 434 aaPredicted RBP19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 EXD1Q8NHP7 514 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 RPGRIP1Q96KN7 1286 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 CORO1BQ9BR76 489 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 PRKD2Q9BZL6 878 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 LMCD1Q9NZU5 365 aa19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 TTC7AQ9ULT0 858 aaPredicted RBP19.67■□□□□ 0.74
PDLIM3-202ENST00000284770 SPDYE4A6NLX3 237 aa19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 MDM4O15151 490 aa19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 CEP104O60308 925 aa19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 GABRR2P28476 465 aa19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 ATP5C1P36542 298 aaKnown RBP19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 PAFAH1B1P43034 410 aa19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 EPHA5P54756 1037 aa19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 AIF1P55008 147 aa19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 ZNF211Q13398 564 aaPredicted RBP19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 NNTQ13423 1086 aa19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 NAA30Q147X3 362 aaPredicted RBP19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 GAREM2Q75VX8 874 aa19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 RCOR2Q8IZ40 523 aa19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 CCDC185Q8N715 623 aa19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 VN1R2Q8NFZ6 395 aa19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 HSPH1Q92598 858 aa19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 TTYH1Q9H313 450 aaPredicted RBP19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 WDCPQ9H6R7 721 aa19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 MARCH2Q9P0N8 246 aa19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 V9GYY5 206 aaPredicted RBP19.66■□□□□ 0.74
PDLIM3-202ENST00000284770 CCDC195A0A1B0GUA6 201 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 MSI1O43347 362 aaKnown RBP19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 CDC25CP30307 473 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 ZNF697Q5TEC3 545 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 RAPGEF5Q92565 580 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 NTAN1Q96AB6 310 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 ACSF2Q96CM8 615 aaPredicted RBP19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 SNRNP25Q9BV90 132 aaKnown RBP19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 IGFLR1Q9H665 355 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 KLHL11Q9NVR0 708 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 HCFC1R1Q9NWW0 138 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 DNMT3BQ9UBC3 853 aaKnown RBP19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 DNMT3LQ9UJW3 386 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 FZD10Q9ULW2 581 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 TLR6Q9Y2C9 796 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 COCHO43405 550 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 PAPLNO95428 1278 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 FGF19O95750 216 aa19.65■□□□□ 0.74
PDLIM3-202ENST00000284770 OAS1P00973 400 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms