RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 MAGED2Q9UNF1 606 aaPredicted RBP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 PLAAQ9Y263 795 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 CDY1Q9Y6F8 540 aa11.42□□□□□ -0.58
GGPS1-201ENST00000282841 MYO18AQ92614 2054 aaKnown RBP11.42□□□□□ -0.58
GGPS1-201ENST00000282841 NUP205Q92621 2012 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 SPTBN5Q9NRC6 3674 aaKnown RBP11.41□□□□□ -0.58
GGPS1-201ENST00000282841 TSC2P49815 1807 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 BHMG1C9JSJ3 638 aaPredicted RBP11.41□□□□□ -0.58
GGPS1-201ENST00000282841 H7C0C1 242 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 DPYSL4O14531 572 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 GAS8O95995 478 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 ATF2P15336 505 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 RAG1P15918 1043 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 TNFRSF8P28908 595 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 ATP5OP48047 213 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 ALDH7A1P49419 539 aaKnown RBP11.41□□□□□ -0.58
GGPS1-201ENST00000282841 SNX16P57768 344 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 CFAP58Q5T655 872 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 ZDHHC17Q8IUH5 632 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 C10orf67Q8IYJ2 551 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 TTC16Q8NEE8 873 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 KCTD13Q8WZ19 329 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 SEC14L1Q92503 715 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 CAVIN3Q969G5 261 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 RNF34Q969K3 372 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 DNAI2Q9GZS0 605 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 C11orf49Q9H6J7 331 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 XPO7Q9UIA9 1087 aaKnown RBP11.41□□□□□ -0.58
GGPS1-201ENST00000282841 DSEQ9UL01 958 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 ZBBXA8MT70 800 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 FOXO6A8MYZ6 492 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 INPPL1O15357 1258 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 MOCS2O96007 188 aaPredicted RBP11.41□□□□□ -0.58
GGPS1-201ENST00000282841 SPATA31D3P0C874 917 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 PTPN9P43378 593 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 VCPP55072 806 aaKnown RBP11.41□□□□□ -0.58
GGPS1-201ENST00000282841 OASLQ15646 514 aaKnown RBP11.41□□□□□ -0.58
GGPS1-201ENST00000282841 BOLA3Q53S33 107 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 RAB41Q5JT25 222 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 IZUMO3Q5VZ72 239 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 DARS2Q6PI48 645 aaKnown RBP11.41□□□□□ -0.58
GGPS1-201ENST00000282841 SPATA31D4Q6ZUB0 917 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 BBS12Q6ZW61 710 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 CENPIQ92674 756 aaPredicted RBP11.41□□□□□ -0.58
GGPS1-201ENST00000282841 P3H4Q92791 437 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 NPY6RQ99463 290 aa11.41□□□□□ -0.58
GGPS1-201ENST00000282841 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.41□□□□□ -0.58
GGPS1-201ENST00000282841 A0A1W2PQH9 124 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 TCRBV7S3A2A0A539 114 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 TRAPPC3O43617 180 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 OAZ2O95190 189 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 ACSL3O95573 720 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 CXCL10P02778 98 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 SRGAP2BP0DMP2 458 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 SYN1P17600 705 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 NOS2P35228 1153 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 CALCOCO2Q13137 446 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 CLUL1Q15846 466 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 TTC19Q6DKK2 380 aaPredicted RBP11.4□□□□□ -0.58
GGPS1-201ENST00000282841 TAC4Q86UU9 113 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 CSNK1G1Q9HCP0 422 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 AAASQ9NRG9 546 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 ANAPC5Q9UJX4 755 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 NEU2Q9Y3R4 380 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 MYO9BQ13459 2157 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 DAB1O75553 588 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 VNN2O95498 520 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 HSPA1AP0DMV8 641 aaKnown RBP11.4□□□□□ -0.58
GGPS1-201ENST00000282841 HSPA1BP0DMV9 641 aaKnown RBP11.4□□□□□ -0.58
GGPS1-201ENST00000282841 KLRC2P26717 231 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 SLCO1A2P46721 670 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 CEP85LQ5SZL2 805 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 ANKRD22Q5VYY1 191 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 SCD5Q86SK9 330 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 ALLCQ8N6M5 410 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 SLC35B2Q8TB61 432 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 DEPDC1BQ8WUY9 529 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 RSAD2Q8WXG1 361 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 C9orf72Q96LT7 481 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 CSPG4P5Q96PW8 444 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 LGMNQ99538 433 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 ZCWPW1Q9H0M4 648 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 CNGB3Q9NQW8 809 aa11.4□□□□□ -0.58
GGPS1-201ENST00000282841 SCAMP3O14828 347 aaKnown RBP11.39□□□□□ -0.59
GGPS1-201ENST00000282841 RNF40O75150 1001 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 HMBSP08397 361 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 TYMPP19971 482 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 RBL1P28749 1068 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 OR1D2P34982 312 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 COPS2P61201 443 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 PTK6Q13882 451 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 FASTKD3Q14CZ7 662 aaKnown RBP11.39□□□□□ -0.59
GGPS1-201ENST00000282841 ACAP1Q15027 740 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 PPP2R5EQ16537 467 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 MAIP1Q8WWC4 291 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 CASP10Q92851 521 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 MRRFQ96E11 262 aaKnown RBP11.39□□□□□ -0.59
GGPS1-201ENST00000282841 COLEC11Q9BWP8 271 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 TKTL2Q9H0I9 626 aa11.39□□□□□ -0.59
GGPS1-201ENST00000282841 ADAM7Q9H2U9 754 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms