RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 ASIC3Q9UHC3 531 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 RASAL2Q9UJF2 1139 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 ALPK3Q96L96 1907 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 GRM6O15303 877 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 EP400NLQ6ZTU2 488 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 CCDC25Q86WR0 208 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 RCOR2Q8IZ40 523 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 ARNTL2Q8WYA1 636 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 KCTD15Q96SI1 283 aaPredicted RBP13.84□□□□□ -0.19
ACER3-201ENST00000278544 MTRRQ9UBK8 725 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 hCG_1818297A0A087WSY0 165 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 DPYSL3Q14195 570 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 RAB41Q5JT25 222 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 ERMARDQ5T6L9 678 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 UHMK1Q8TAS1 419 aaKnown RBP13.84□□□□□ -0.19
ACER3-201ENST00000278544 RBM41Q96IZ5 413 aaKnown RBP13.84□□□□□ -0.19
ACER3-201ENST00000278544 PCDH18Q9HCL0 1135 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 GKN1Q9NS71 199 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 STIM2Q9P246 746 aa13.84□□□□□ -0.19
ACER3-201ENST00000278544 BAIAP3O94812 1187 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 FAM153BP0C7A2 387 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 PLTPP55058 493 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 GBE1Q04446 702 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 SIX1Q15475 284 aaPredicted RBP13.83□□□□□ -0.2
ACER3-201ENST00000278544 FAM153CQ494X1 144 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 CMTR2Q8IYT2 770 aaKnown RBP13.83□□□□□ -0.2
ACER3-201ENST00000278544 ZNF461Q8TAF7 563 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 FNIP1Q8TF40 1166 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 CASKIN2Q8WXE0 1202 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 PIK3R5Q8WYR1 880 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 CELF6Q96J87 481 aaKnown RBP13.83□□□□□ -0.2
ACER3-201ENST00000278544 FAM124BQ9H5Z6 455 aaPredicted RBP13.83□□□□□ -0.2
ACER3-201ENST00000278544 FAM153AQ9UHL3 310 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 LINC01553A4QN01 128 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 SGK1O00141 431 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 RARGP13631 454 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 ALDH1A3P47895 512 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 FAXCQ5TGI0 409 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 ZDHHC17Q8IUH5 632 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 NPY6RQ99463 290 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 CWC15Q9P013 229 aaKnown RBP13.83□□□□□ -0.2
ACER3-201ENST00000278544 SEPT10Q9P0V9 454 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 CDH22Q9UJ99 828 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 TRIOO75962 3097 aa13.83□□□□□ -0.2
ACER3-201ENST00000278544 GOLGA8MH3BSY2 632 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 H7C0C1 242 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 CCL16O15467 120 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 DAB1O75553 588 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 ATP5OP48047 213 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 NIPA2Q8N8Q9 360 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 PCDH19Q8TAB3 1148 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 SPATA18Q8TC71 538 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 NAP1L3Q99457 506 aaPredicted RBP13.82□□□□□ -0.2
ACER3-201ENST00000278544 MPP6Q9NZW5 540 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 SLC12A8A0AV02 714 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 TGM5O43548 720 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 HAPLN1P10915 354 aaPredicted RBP13.82□□□□□ -0.2
ACER3-201ENST00000278544 MAN1A1P33908 653 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 RDXP35241 583 aaKnown RBP13.82□□□□□ -0.2
ACER3-201ENST00000278544 COILP38432 576 aaPredicted RBP13.82□□□□□ -0.2
ACER3-201ENST00000278544 CIR1Q86X95 450 aaPredicted RBP13.82□□□□□ -0.2
ACER3-201ENST00000278544 JAMLQ86YT9 394 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 SPPL2BQ8TCT7 592 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 SMG9Q9H0W8 520 aaKnown RBP13.82□□□□□ -0.2
ACER3-201ENST00000278544 NEUROG2Q9H2A3 272 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 AAASQ9NRG9 546 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 HCFC1R1Q9NWW0 138 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 TTLL3Q9Y4R7 772 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 C3orf70A6NLC5 250 aaPredicted RBP13.82□□□□□ -0.2
ACER3-201ENST00000278544 SLC38A8A6NNN8 435 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 FBXO21O94952 628 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 TJP3O95049 919 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 KCNQ1P51787 676 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 GDF10P55107 478 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 DSG1Q02413 1049 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 VSTM1Q6UX27 236 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 TFAP2DQ7Z6R9 452 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 MMGT1Q8N4V1 131 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 CCNYQ8ND76 341 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 RNF14Q9UBS8 474 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 YIPF1Q9Y548 306 aa13.82□□□□□ -0.2
ACER3-201ENST00000278544 C2orf78A6NCI8 922 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 FSCN2O14926 492 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 TLR5O60602 858 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 EFCAB14O75071 495 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 PHF2O75151 1096 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 IL4RP24394 825 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 HS6ST3Q8IZP7 471 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 FAM71DQ8N9W8 422 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 DCLK3Q9C098 648 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 UBE2OQ9C0C9 1292 aaKnown RBP13.81□□□□□ -0.2
ACER3-201ENST00000278544 TRIM66O15016 1216 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 TBC1D4O60343 1298 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 L1CAMP32004 1257 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 CYP4F8P98187 520 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 STXBP5Q5T5C0 1151 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 SLC8B1Q6J4K2 584 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 LEKR1Q6ZMV7 388 aa13.81□□□□□ -0.2
ACER3-201ENST00000278544 SND1Q7KZF4 910 aaKnown RBP eCLIP13.81□□□□□ -0.2
ACER3-201ENST00000278544 ZNF354CQ86Y25 554 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms