RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 ARL4CP56559 192 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 NOMO3P69849 1222 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 SMAD3P84022 425 aaKnown RBP10.72□□□□□ -0.69
UPF3B-201ENST00000276201 GPS1Q13098 491 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 LAMB3Q13751 1172 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 SEPT7Q16181 437 aaKnown RBP10.72□□□□□ -0.69
UPF3B-201ENST00000276201 DBN1Q16643 649 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 FBXO47Q5MNV8 452 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 IER5Q5VY09 327 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 SH2D5Q6ZV89 423 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 ZC3H18Q86VM9 953 aaKnown RBP10.72□□□□□ -0.69
UPF3B-201ENST00000276201 PPIL6Q8IXY8 311 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 PHC3Q8NDX5 983 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 SLC35B2Q8TB61 432 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 TCP10LQ8TDR4 215 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 TAS1R2Q8TE23 839 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 OXNAD1Q96HP4 312 aaPredicted RBP10.72□□□□□ -0.69
UPF3B-201ENST00000276201 APOPT1Q96IL0 206 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 C7orf26Q96N11 449 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 CENPKQ9BS16 269 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 TMEM120AQ9BXJ8 343 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 CDHR5Q9HBB8 845 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 ACP6Q9NPH0 428 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 ANKEF1Q9NU02 776 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 DNPEPQ9ULA0 475 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 PLA2G4CQ9UP65 541 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 LAMA2P24043 3122 aaKnown RBP10.72□□□□□ -0.69
UPF3B-201ENST00000276201 DENND3A2RUS2 1198 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 TISP43B9A030 160 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 TM7SF2O76062 418 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 PGM1P36871 562 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 ACTR3P61158 418 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 TAP1Q03518 808 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 ADCY1Q08828 1119 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 PDIA2Q13087 525 aaKnown RBP10.72□□□□□ -0.69
UPF3B-201ENST00000276201 HIF1AQ16665 826 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 C6orf163Q5TEZ5 329 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 SPOCD1Q6ZMY3 1216 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 CBWD2Q8IUF1 395 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 NIPA2Q8N8Q9 360 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 FEZF2Q8TBJ5 459 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 PIP4K2CQ8TBX8 421 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 WDR60Q8WVS4 1066 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 SEPT8Q92599 483 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 EZH1Q92800 747 aaPredicted RBP10.72□□□□□ -0.69
UPF3B-201ENST00000276201 CEP170P1Q96L14 293 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 PPP1R16BQ96T49 567 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 PAFAH2Q99487 392 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 NTPCRQ9BSD7 190 aaKnown RBP10.72□□□□□ -0.69
UPF3B-201ENST00000276201 SPATA16Q9BXB7 569 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 HEMGNQ9BXL5 484 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 AGO3Q9H9G7 860 aaKnown RBP10.72□□□□□ -0.69
UPF3B-201ENST00000276201 PNPLA8Q9NP80 782 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 PCMTD2Q9NV79 361 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 TBX20Q9UMR3 447 aa10.72□□□□□ -0.69
UPF3B-201ENST00000276201 hCG_1818297A0A087WSY0 165 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 IQANK1A0A1B0GTG1 560 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 CFAP69A5D8W1 941 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 M0QZ92 97 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 FCHO1O14526 889 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 GPR32O75388 356 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 MAFO75444 373 aaPredicted RBP10.71□□□□□ -0.69
UPF3B-201ENST00000276201 ANPEPP15144 967 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 GLRA2P23416 452 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 WDR5P61964 334 aaKnown RBP10.71□□□□□ -0.69
UPF3B-201ENST00000276201 AP2B1P63010 937 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 DSG1Q02413 1049 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 LSAMPQ13449 338 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 GRM2Q14416 872 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 FASTKD3Q14CZ7 662 aaKnown RBP10.71□□□□□ -0.69
UPF3B-201ENST00000276201 TAZQ16635 292 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 KIZQ2M2Z5 673 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 TSHZ1Q6ZSZ6 1077 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 ACAD11Q709F0 780 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 SV2AQ7L0J3 742 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 KBTBD2Q8IY47 623 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 ZBED8Q8IZ13 594 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 PDCD7Q8N8D1 485 aaKnown RBP10.71□□□□□ -0.69
UPF3B-201ENST00000276201 NAT8LQ8N9F0 302 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 ECSITQ9BQ95 431 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 SIKE1Q9BRV8 207 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 C1orf112Q9NSG2 853 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 PARVAQ9NVD7 372 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 KCNG1Q9UIX4 513 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 TMCO1Q9UM00 188 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 ZNF148Q9UQR1 794 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 AKT3Q9Y243 479 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 PTPRSQ13332 1948 aa10.71□□□□□ -0.69
UPF3B-201ENST00000276201 MICAL3Q7RTP6 2002 aa10.71□□□□□ -0.7
UPF3B-201ENST00000276201 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.7□□□□□ -0.7
UPF3B-201ENST00000276201 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.7□□□□□ -0.7
UPF3B-201ENST00000276201 ABHD14A-ACY1A0A1B0GW23 586 aa10.7□□□□□ -0.7
UPF3B-201ENST00000276201 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.7□□□□□ -0.7
UPF3B-201ENST00000276201 AP1G1O43747 822 aa10.7□□□□□ -0.7
UPF3B-201ENST00000276201 CIB2O75838 187 aa10.7□□□□□ -0.7
UPF3B-201ENST00000276201 PABPC4LP0CB38 370 aaKnown RBP10.7□□□□□ -0.7
UPF3B-201ENST00000276201 SERPINB3P29508 390 aa10.7□□□□□ -0.7
UPF3B-201ENST00000276201 GSTT1P30711 240 aa10.7□□□□□ -0.7
UPF3B-201ENST00000276201 CD52P31358 61 aa10.7□□□□□ -0.7
UPF3B-201ENST00000276201 DEFB103AP81534 67 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms