RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 CDK18Q07002 472 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 SLC10A2Q12908 348 aaPredicted RBP9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 STX3Q13277 289 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 ATP1A4Q13733 1029 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 NRF1Q16656 503 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 ZNF423Q2M1K9 1284 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 C16orf46Q6P387 395 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 XKR5Q6UX68 686 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 CTAGE3PQ8IX95 158 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 ADGRF2Q8IZF7 708 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 ACTL9Q8TC94 416 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 LRGUKQ96M69 825 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 NT5C1BQ96P26 610 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 PADI4Q9UM07 663 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 CDC14AQ9UNH5 594 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 FADS3Q9Y5Q0 445 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 IKBKGQ9Y6K9 419 aa9.49□□□□□ -0.89
HMGCLL1-201ENST00000274901 C3orf70A6NLC5 250 aaPredicted RBP9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 ZNF195O14628 629 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 PSMD10O75832 226 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 ATE1O95260 518 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 ITGBL1O95965 494 aaPredicted RBP9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 OCM2P0CE71 109 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 OCMP0CE72 109 aaPredicted RBP9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 GMPRP36959 345 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 PEX3P56589 373 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 RPL10AP62906 217 aaKnown RBP9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 UBXN2AP68543 259 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 AP3B2Q13367 1082 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 MYBPC2Q14324 1141 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 TTC39BQ5VTQ0 682 aaPredicted RBP9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 PLA2G4FQ68DD2 849 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 PLEKHA7Q6IQ23 1121 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 TMEM214Q6NUQ4 689 aaKnown RBP9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 STXBP4Q6ZWJ1 553 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 NANOGNBQ7Z5D8 188 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 TRIML2Q8N7C3 387 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 RNF148Q8N7C7 305 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 RAB3IL1Q8TBN0 382 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 ISOC1Q96CN7 298 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 SNX27Q96L92 541 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 KLHL32Q96NJ5 620 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 GPATCH1Q9BRR8 931 aaKnown RBP9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 PAIP1Q9H074 479 aaKnown RBP9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 IFT122Q9HBG6 1241 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 TUFT1Q9NNX1 390 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 THEGQ9P2T0 379 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 HESX1Q9UBX0 185 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 PCDHAC2Q9Y5I4 1007 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 TEX264Q9Y6I9 313 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 NRXN2Q9P2S2 1712 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 TMEM150BA6NC51 233 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 DCXO43602 365 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 ZBTB11O95625 1053 aaPredicted RBP9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 CSH1P0DML2 217 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 CSH2P0DML3 217 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 NOMO3P69849 1222 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 BASP1P80723 227 aaKnown RBP9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 PPP2R5DQ14738 602 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 SNRNP35Q16560 246 aaKnown RBP9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 MAP7D1Q3KQU3 841 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 PPM1LQ5SGD2 360 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 RARS2Q5T160 578 aaKnown RBP9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 C6orf183Q5T699 404 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 MBLAC2Q68D91 279 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 KRT39Q6A163 491 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 PDPK2PQ6A1A2 396 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 SPOPLQ6IQ16 392 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 SLC26A11Q86WA9 606 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 PDIK1LQ8N165 341 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 TMEM102Q8N9M5 508 aaPredicted RBP9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 FAM71DQ8N9W8 422 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 TANKQ92844 425 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 C12orf43Q96C57 262 aaKnown RBP9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 AGAP3Q96P47 875 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 SORT1Q99523 831 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 DDX4Q9NQI0 724 aaKnown RBP9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 MAN1C1Q9NR34 630 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 OLAHQ9NV23 265 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 EPS15L1Q9UBC2 864 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 EMCNQ9ULC0 261 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 SORCS3Q9UPU3 1222 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 COQ4Q9Y3A0 265 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 NR2E3Q9Y5X4 410 aa9.48□□□□□ -0.89
HMGCLL1-201ENST00000274901 J3QRK9 145 aa9.47□□□□□ -0.89
HMGCLL1-201ENST00000274901 IPO5O00410 1097 aaKnown RBP9.47□□□□□ -0.89
HMGCLL1-201ENST00000274901 PMM2O15305 246 aa9.47□□□□□ -0.89
HMGCLL1-201ENST00000274901 RNASEH2AO75792 299 aaKnown RBP9.47□□□□□ -0.89
HMGCLL1-201ENST00000274901 KLHL2O95198 593 aa9.47□□□□□ -0.89
HMGCLL1-201ENST00000274901 INHBBP09529 407 aa9.47□□□□□ -0.89
HMGCLL1-201ENST00000274901 FGF3P11487 239 aaPredicted RBP9.47□□□□□ -0.89
HMGCLL1-201ENST00000274901 COX4I1P13073 169 aa9.47□□□□□ -0.89
HMGCLL1-201ENST00000274901 P4HA1P13674 534 aa9.47□□□□□ -0.89
HMGCLL1-201ENST00000274901 ZNF26P17031 533 aaPredicted RBP9.47□□□□□ -0.89
HMGCLL1-201ENST00000274901 NCF2P19878 526 aaPredicted RBP9.47□□□□□ -0.89
HMGCLL1-201ENST00000274901 PRDX6P30041 224 aa9.47□□□□□ -0.89
HMGCLL1-201ENST00000274901 GRM5P41594 1212 aa9.47□□□□□ -0.89
HMGCLL1-201ENST00000274901 PKNOX1P55347 436 aa9.47□□□□□ -0.89
HMGCLL1-201ENST00000274901 SPIDRQ14159 915 aa9.47□□□□□ -0.89
HMGCLL1-201ENST00000274901 SMTNL2Q2TAL5 461 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 273.1 ms